DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB2 and elm

DIOPT Version :10

Sequence 1:NP_524874.2 Gene:CanB2 / 46456 FlyBaseID:FBgn0015614 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_649568.1 Gene:elm / 40695 FlyBaseID:FBgn0037358 Length:189 Species:Drosophila melanogaster


Alignment Length:185 Identity:72/185 - (38%)
Similarity:111/185 - (60%) Gaps:17/185 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNETSL--------PMEMCSNFDADEIRRLGKRFRKLDLDNSGALSVDEFMSLPELQQNPLVQR 57
            |||::||        .::..:.|..::|.||..||..||.::.|.||.::.|.:|||..|||.:|
  Fly     1 MGNKSSLFLRNEEIAQIQEETGFTPNQIERLYSRFTSLDRNDCGTLSREDLMRIPELAINPLCER 65

  Fly    58 VIDIFDADGNGE-VDFKEFIQGVSQF----SVKGDKLS----KLRFAFRIYDMDNDGYISNGELF 113
            ::..|.|:.|.: |:|::|:..::.|    ..|..||:    ||:|||::||:|:||.||..||.
  Fly    66 IVHSFFAESNDDRVNFRQFMNVLAHFRPLRDNKQSKLNSREEKLKFAFKMYDLDDDGVISRDELL 130

  Fly   114 QVLKMMVGNNLKDTQLQQIVDKTIGFADKDEDGKISFDEFCSVVGNTDIHKKMVV 168
            .:|.||||.|:...||..|.::||..||....|||||::||..:..||:.:||.:
  Fly   131 SILHMMVGANISQDQLVSIAERTILEADLCCQGKISFEDFCKALDRTDVDQKMSI 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanB2NP_524874.2 FRQ1 20..157 CDD:444056 62/145 (43%)
elmNP_649568.1 FRQ1 27..174 CDD:444056 62/146 (42%)

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