DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB2 and kcnip3a

DIOPT Version :9

Sequence 1:NP_001246192.1 Gene:CanB2 / 46456 FlyBaseID:FBgn0015614 Length:170 Species:Drosophila melanogaster
Sequence 2:XP_005169145.1 Gene:kcnip3a / 393792 ZFINID:ZDB-GENE-040426-1791 Length:259 Species:Danio rerio


Alignment Length:156 Identity:41/156 - (26%)
Similarity:79/156 - (50%) Gaps:21/156 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SNFDADEIRRLGKRFRKLDLDN---SGALSVDEFMSL-----PELQQNPLVQRVIDIFDADGNGE 69
            :.|...|::.|.:.|:     |   ||.:..:.|.::     |:.........:.:.||.|.||.
Zfish    89 TKFTKKELQSLYRGFK-----NECPSGLVDEETFKTIYSQFFPQGDATTYAHFLFNAFDLDRNGS 148

  Fly    70 VDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKM---MVGN----NLKDT 127
            :.|::|:.|:|.. ::|....||.:||.:||::.||||:..|:..::|.   |:|.    :::|.
Zfish   149 IRFEDFVIGLSVL-LRGTVTEKLNWAFNLYDINKDGYITKEEMLLIMKSIYDMMGRYTYPSVRDE 212

  Fly   128 QLQQIVDKTIGFADKDEDGKISFDEF 153
            ...:.|:|.....|::.||.::.:||
Zfish   213 APSEHVEKFFQKMDRNRDGVVTIEEF 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanB2NP_001246192.1 FRQ1 13..154 CDD:227455 41/156 (26%)
kcnip3aXP_005169145.1 FRQ1 82..248 CDD:227455 41/156 (26%)
EF-hand_8 108..155 CDD:290545 10/46 (22%)
EFh 133..195 CDD:238008 21/62 (34%)
EFh 169..240 CDD:238008 22/70 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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