DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB2 and hpca

DIOPT Version :10

Sequence 1:NP_524874.2 Gene:CanB2 / 46456 FlyBaseID:FBgn0015614 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_957017.1 Gene:hpca / 393696 ZFINID:ZDB-GENE-040426-1683 Length:193 Species:Danio rerio


Alignment Length:172 Identity:55/172 - (31%)
Similarity:89/172 - (51%) Gaps:22/172 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNETS-LPMEMC------SNFDADEIRRLGKRFRKLDLDNSGALSVDEFMSL-----PELQQNP 53
            ||.:.| |..||.      :.|...|::...|.|.| |.. ||.|:|:||..:     |....:.
Zfish     1 MGKQNSKLRPEMLQDLRENTEFTDHELQEWYKGFLK-DCP-SGHLNVEEFKKIYANFFPYGDASK 63

  Fly    54 LVQRVIDIFDADGNGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQVLK- 117
            ..:.|...||.:.:|.:||:|||..:|..| :|....||::||.:||:|.:||||..|:.:::: 
Zfish    64 FAEHVFRTFDTNNDGTIDFREFIIALSVTS-RGKLEQKLKWAFSMYDLDGNGYISREEMLEIVQA 127

  Fly   118 --MMVGNNLK----DTQLQQIVDKTIGFADKDEDGKISFDEF 153
              .||.:.:|    ::..::..||.....|.:.|||:|.:||
Zfish   128 IYKMVSSVMKMPEDESTPEKRTDKIFRQMDLNNDGKLSLEEF 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanB2NP_524874.2 FRQ1 20..157 CDD:444056 47/146 (32%)
hpcaNP_957017.1 FRQ1 21..175 CDD:444056 49/152 (32%)

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