DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB2 and Frq1

DIOPT Version :10

Sequence 1:NP_524874.2 Gene:CanB2 / 46456 FlyBaseID:FBgn0015614 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster


Alignment Length:150 Identity:53/150 - (35%)
Similarity:84/150 - (56%) Gaps:14/150 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 FDADEIRRLGKRFRKLDLDNSGALSVDEFMSL-----PELQQNPLVQRVIDIFDADGNGEVDFKE 74
            |...|||:..|.|.| |..| |.|:...|:.:     |:...:.....|..:||.:.:|.::|:|
  Fly    22 FTEKEIRQWHKGFLK-DCPN-GLLTEQGFIKIYKQFFPQGDPSKFASLVFRVFDENNDGSIEFEE 84

  Fly    75 FIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQV---LKMMVGNNLK---DTQLQQIV 133
            ||:.:|..| ||:...||::|||:||:||||||:..|::.:   :..|||...:   :...|:.|
  Fly    85 FIRALSVTS-KGNLDEKLQWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQQPQSEDENTPQKRV 148

  Fly   134 DKTIGFADKDEDGKISFDEF 153
            ||.....||:.|||::.:||
  Fly   149 DKIFDQMDKNHDGKLTLEEF 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanB2NP_524874.2 FRQ1 20..157 CDD:444056 50/144 (35%)
Frq1NP_573271.1 EFh 39..89 CDD:415501 13/50 (26%)
FRQ1 <69..173 CDD:444056 38/100 (38%)

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