DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB2 and HPCAL1

DIOPT Version :10

Sequence 1:NP_524874.2 Gene:CanB2 / 46456 FlyBaseID:FBgn0015614 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_002140.2 Gene:HPCAL1 / 3241 HGNCID:5145 Length:193 Species:Homo sapiens


Alignment Length:153 Identity:50/153 - (32%)
Similarity:83/153 - (54%) Gaps:15/153 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SNFDADEIRRLGKRFRKLDLDNSGALSVDEFMSL-----PELQQNPLVQRVIDIFDADGNGEVDF 72
            :.|...|::...|.|.| |.. :|.|:||||..:     |....:...:.|...||.:|:|.:||
Human    20 TEFTDHELQEWYKGFLK-DCP-TGHLTVDEFKKIYANFFPYGDASKFAEHVFRTFDTNGDGTIDF 82

  Fly    73 KEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQVLK---MMVGNNLK----DTQLQ 130
            :|||..:|..| :|....||::||.:||:|.:||||..|:.::::   .||.:.:|    ::..:
Human    83 REFIIALSVTS-RGKLEQKLKWAFSMYDLDGNGYISRSEMLEIVQAIYKMVSSVMKMPEDESTPE 146

  Fly   131 QIVDKTIGFADKDEDGKISFDEF 153
            :..||.....|.:.|||:|.:||
Human   147 KRTDKIFRQMDTNNDGKLSLEEF 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanB2NP_524874.2 FRQ1 20..157 CDD:444056 48/146 (33%)
HPCAL1NP_002140.2 FRQ1 21..175 CDD:444056 50/152 (33%)

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