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Protein Alignment CanB2 and Guca1a
DIOPT Version :9
Sequence 1: | NP_001246192.1 |
Gene: | CanB2 / 46456 |
FlyBaseID: | FBgn0015614 |
Length: | 170 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001100357.1 |
Gene: | Guca1a / 301233 |
RGDID: | 1308712 |
Length: | 202 |
Species: | Rattus norvegicus |
Alignment Length: | 129 |
Identity: | 37/129 - (28%) |
Similarity: | 67/129 - (51%) |
Gaps: | 13/129 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 35 SGALSVDEFMSL-------PELQQNPLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVKGDKLSKL 92
||.|::.||... |...| .|:::.:.||.:.:|.:||.|::..:| ..:||....||
Rat 31 SGQLTLYEFRQFFGLKNLSPSASQ--YVEQMFETFDFNKDGYIDFMEYVAALS-LVLKGKVEQKL 92
Fly 93 RFAFRIYDMDNDGYISNGELFQVLK-MMVGNNLKDTQL--QQIVDKTIGFADKDEDGKISFDEF 153
|:.|::||:|.:|.|...||..::: :...|...|:.: ::..|......|.:.||::|.:||
Rat 93 RWYFKLYDVDGNGCIDRDELLTIIRAIRTINPWSDSSMSAEEFTDTVFAKIDINGDGELSLEEF 156
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CanB2 | NP_001246192.1 |
FRQ1 |
13..154 |
CDD:227455 |
37/129 (29%) |
Guca1a | NP_001100357.1 |
FRQ1 |
12..163 |
CDD:227455 |
37/129 (29%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1271942at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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