DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB2 and ncs-4

DIOPT Version :10

Sequence 1:NP_524874.2 Gene:CanB2 / 46456 FlyBaseID:FBgn0015614 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_509708.2 Gene:ncs-4 / 184757 WormBaseID:WBGene00008998 Length:224 Species:Caenorhabditis elegans


Alignment Length:155 Identity:34/155 - (21%)
Similarity:74/155 - (47%) Gaps:13/155 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SNFDADEIRRLGKRFRKLD---LDNSGALSVDEFMSL-PELQQNPLVQRVIDIFDADGNGEVDFK 73
            ::|..:|:|.:.:.|::..   :.|...:. ::|..| |..........:.:.||.||||.::|:
 Worm    52 THFSKNEVRAIYRAFKETSPNAVINKNIMR-EKFAELFPHGDIEHYSDLLFETFDNDGNGTINFQ 115

  Fly    74 EFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKMM---VGNNLKD----TQLQQ 131
            ||::.:| ...:|....||.:.:::||....|.::...||.|:..|   :|.:.:.    .|..:
 Worm   116 EFVKALS-ILCRGTLDEKLDWLYKLYDPKEKGEVTWDRLFYVITSMDDLMGKHARPHHTREQKCE 179

  Fly   132 IVDKTIGFADKDEDGKISFDEFCSV 156
            :.::.....|..:.|:|:..:|..:
 Worm   180 LTNQVFAKFDVGKKGRITKKDFLHI 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanB2NP_524874.2 FRQ1 20..157 CDD:444056 32/148 (22%)
ncs-4NP_509708.2 FRQ1 79..206 CDD:444056 29/128 (23%)
EFh 101..149 CDD:238008 16/48 (33%)

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