DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB2 and ncs-4

DIOPT Version :9

Sequence 1:NP_001246192.1 Gene:CanB2 / 46456 FlyBaseID:FBgn0015614 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_509708.2 Gene:ncs-4 / 184757 WormBaseID:WBGene00008998 Length:224 Species:Caenorhabditis elegans


Alignment Length:155 Identity:34/155 - (21%)
Similarity:74/155 - (47%) Gaps:13/155 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SNFDADEIRRLGKRFRKLD---LDNSGALSVDEFMSL-PELQQNPLVQRVIDIFDADGNGEVDFK 73
            ::|..:|:|.:.:.|::..   :.|...:. ::|..| |..........:.:.||.||||.::|:
 Worm    52 THFSKNEVRAIYRAFKETSPNAVINKNIMR-EKFAELFPHGDIEHYSDLLFETFDNDGNGTINFQ 115

  Fly    74 EFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKMM---VGNNLKD----TQLQQ 131
            ||::.:| ...:|....||.:.:::||....|.::...||.|:..|   :|.:.:.    .|..:
 Worm   116 EFVKALS-ILCRGTLDEKLDWLYKLYDPKEKGEVTWDRLFYVITSMDDLMGKHARPHHTREQKCE 179

  Fly   132 IVDKTIGFADKDEDGKISFDEFCSV 156
            :.::.....|..:.|:|:..:|..:
 Worm   180 LTNQVFAKFDVGKKGRITKKDFLHI 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanB2NP_001246192.1 FRQ1 13..154 CDD:227455 33/151 (22%)
ncs-4NP_509708.2 FRQ1 41..211 CDD:227455 34/155 (22%)
EFh 101..149 CDD:238008 16/48 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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