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Protein Alignment CanB2 and rcvrn.1
DIOPT Version :9
Sequence 1: | NP_001246192.1 |
Gene: | CanB2 / 46456 |
FlyBaseID: | FBgn0015614 |
Length: | 170 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_002937040.1 |
Gene: | rcvrn.1 / 100302393 |
XenbaseID: | XB-GENE-973335 |
Length: | 202 |
Species: | Xenopus tropicalis |
Alignment Length: | 185 |
Identity: | 43/185 - (23%) |
Similarity: | 85/185 - (45%) |
Gaps: | 26/185 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MGNETSL--------PMEMCSNFDADEIRRLGKRFRKLDLDNSGALSVDEFMSL-----PELQQN 52
|||..|. .:::.:.|..:|:....:.| |....:|.:|..:|..: |:....
Frog 1 MGNSKSSALSKEILEELQLNTKFSQEELCTWYQSF--LKECPTGRISKQQFEGIYSKFFPDADPK 63
Fly 53 PLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQVL- 116
...:.|...||::.:|.:||||::..:...| .|....||.:||.:||:|.:|.|:..|:.:::
Frog 64 AYARHVFRSFDSNNDGTLDFKEYMIALHMTS-SGKANQKLEWAFSLYDVDGNGTINKSEVLEIIT 127
Fly 117 ---KMMVGNNLK-----DTQLQQIVDKTIGFADKDEDGKISFDEFC-SVVGNTDI 162
||:...:.| :...::..:|...|..|.::.|::..||. .::.|.:|
Frog 128 AIFKMINTEDQKHLPEDENTPERRTNKIWDFFGKKDNDKLTEGEFIQGIMNNKEI 182
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CanB2 | NP_001246192.1 |
FRQ1 |
13..154 |
CDD:227455 |
36/154 (23%) |
rcvrn.1 | XP_002937040.1 |
FRQ1 |
14..182 |
CDD:227455 |
38/170 (22%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG53747 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1271942at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.930 |
|
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