DRSC/TRiP Functional Genomics Resources

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Protein Alignment MYO1D and Myo28B1

DIOPT Version :10

Sequence 1:NP_056009.1 Gene:MYO1D / 4642 HGNCID:7598 Length:1006 Species:Homo sapiens
Sequence 2:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster


Alignment Length:872 Identity:301/872 - (34%)
Similarity:475/872 - (54%) Gaps:122/872 - (13%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAEQESLEFGKADFVLMDTVSMPEFMANLRLRFEKGRIYTFIGEVVVSVNPYKLLNIYGRDTIEQ 65
            :..||.:|    |.:.:..:.....:.||:.|:.|..|||:.|.::|::|||::|.||....|:.
  Fly    63 ITSQEDVE----DMITLGDLQEYTILRNLQNRYAKQLIYTYTGSMLVAINPYQILPIYTNREIQL 123

Human    66 YKGRELYERPPHLFAIADAAYKAMKRRSKDTCIVISGESGAGKTEASKYIMQYIAAITNPSQRAE 130
            |:.:.|.|.|||:|||:|.|::.::|..::.|:||||||||||||::|.|:||:|||:     .:
  Fly   124 YRNKSLAELPPHIFAISDNAFQRLQRLKENQCVVISGESGAGKTESTKLILQYLAAIS-----GK 183

Human   131 VERVKNMLLKSNCVLEAFGNAKTNRNDNSSRFGKYMDINFDFKGDPIGGHINNYLLEKSRVIVQQ 195
            ...::..::::|.::||||||||.|||||||||||::|.|..:|...|..|..|||||||::.|.
  Fly   184 HSWIEQQIIEANPIMEAFGNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIVFQS 248

Human   196 PGERSFHSFYQLLQGGSEQMLRSLHLQ-KSLSSYNYIHVGAQLK-SSINDAAEFRVVADAMKVIG 258
            ..||::|.||.:|.|.|......|.|| :|.|.|:|:..|.... ....||.:|..:..||||:.
  Fly   249 RDERNYHIFYCMLAGLSTAERERLKLQEQSPSQYHYLAQGGCFTLPGRGDAKDFADIRAAMKVLS 313

Human   259 FKPEEIQTVYKILAAILHLGNLKFV-----------VDGDTPLIENGKVVSIIAELLSTKTDMVE 312
            |||||:.::..:||||||||||:|.           :| |||.::.      :|:||......:.
  Fly   314 FKPEEVWSILSLLAAILHLGNLRFTATEVANLATAEID-DTPNLQR------VAQLLGIPISALN 371

Human   313 KALLYRTVATGRDIIDKQHTEQEASYGRDAFAKAIYERLFCWIVTRINDIIEVKNYDTTIHGKNT 377
            .||..||:....:.:....:::.|..|||||.|::|:.:|..||.|||:.|. |..|..::.   
  Fly   372 AALTQRTIFVHGEHVTTSLSKEAAIEGRDAFVKSLYDGIFVRIVRRINETIN-KQVDQPMNS--- 432

Human   378 VIGVLDIYGFEIFDNNSFEQFCINYCNEKLQQLFIQLVLKQEQEEYQREGIPWKHIDYFNNQIIV 442
             ||||||:|||.||||||||.||||.||.|||.|:..:.|.||:|||.|.|.|:||::.:||.|:
  Fly   433 -IGVLDIFGFENFDNNSFEQLCINYANENLQQFFVGHIFKMEQDEYQNEHINWQHIEFQDNQQIL 496

Human   443 DLVEQQHKGIIAILDDACMNVGKVTDEMFLEALNSKLGKHAHFSSRKLCASDKILEFDRDFRIRH 507
            ||:..:...:::::|:. ....|.||:..||.|      |....:|.:....|..:... |.|||
  Fly   497 DLIGMKPMNLMSLIDEE-SKFPKGTDQTLLEKL------HVQHGNRSIYVKGKTTQTSL-FGIRH 553

Human   508 YAGDVVYSVIGFIDKNKDTLFQDFKRLMYNSSNPVLKNMWPEGKLSITEVTKRPLTAATLFKNSM 572
            |||.|:|:.:||::||:|:...|.:.|:..|:|..|.:::|. ::.:....|:| |....|:||:
  Fly   554 YAGVVMYNPLGFLEKNRDSFSGDLRTLVQRSTNKYLVDIFPH-EMPMDTAKKQP-TLCVKFRNSL 616

Human   573 IALVDNLASKEPYYVRCIKPNDKKSPQIFDDERCRHQVEYLGLLENVRVRRAGFAFRQTYEKFLH 637
            ..|:..|:...||::||||||:.|.|:.||.|.|..|:.|.|::|..|:||||:..|..|..|:.
  Fly   617 DMLMRTLSQAHPYFIRCIKPNEYKEPKNFDKELCVRQLRYSGMMETARIRRAGYPIRHAYRAFVE 681

Human   638 RYKMISEFTWPNHDLPSDKEAVKKLIERCGFQ--------------DDVAYGKTKIFIRTPRTLF 688
            ||:::.....|              :|:|..:              .|..|||||:|:|..... 
  Fly   682 RYRLLVPPVGP--------------LEQCDCRKLARQICEVALPADSDRQYGKTKLFLRDEDDA- 731

Human   689 TLEELRAQMLIRIVLFLQKVWRGTLARMRYKRTKAALTIIRYYRRYKVKSYIHEVARR-FH---- 748
            :||..|:|::::.::.:|:..|..|.|...||.:.|:..::.|.|.:::...::|.|: ||    
  Fly   732 SLELQRSQLMLKSIVTIQRGIRRVLFRRYMKRYREAIITVQRYWRGRLQRRKYQVMRQGFHRLGA 796

Human   749 --------------------------GVKTMRDYGKHVKWPSPPKVLRRFEEALQTIFNRWRASQ 787
                                      |....:|:.|        |:|.|.::      |:.:..:
  Fly   797 CIAAQQLTTKFTMVRCRTIKLQALSRGYLVRKDFQK--------KLLERRKQ------NQLKKEE 847

Human   788 LIKSIPASDLPQVRAKVAAVEMLKGQR 814
            |:|.....:..:    :..::.||.|:
  Fly   848 LLKLAKMKEAEE----LLRLQQLKEQK 870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYO1DNP_056009.1 MYSc_Myo1 24..682 CDD:276829 267/684 (39%)
Actin-binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU00782 572..594 9/21 (43%)
Myosin_TH1 803..996 CDD:461801 3/12 (25%)
Myo28B1NP_723294.1 MYSc_Myo7 81..726 CDD:276832 267/685 (39%)
IQ 765..785 CDD:197470 3/19 (16%)
Atrophin-1 <820..>946 CDD:460830 12/69 (17%)
MyTH4 1031..1239 CDD:470587
FERM1_F1_Myosin-VII 1243..1334 CDD:340612
B41 1248..1429 CDD:214604
PH-like 1454..1547 CDD:473070
MyTH4 1674..1819 CDD:214535
FERM2_F1_Myosin-VII 1825..1919 CDD:340613
B41 1827..2032 CDD:214604
FERM_C2_MyoVII 2028..2121 CDD:270020
Blue background indicates that the domain is not in the aligned region.

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