DRSC/TRiP Functional Genomics Resources

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Protein Alignment MYO1D and didum

DIOPT Version :9

Sequence 1:NP_056009.1 Gene:MYO1D / 4642 HGNCID:7598 Length:1006 Species:Homo sapiens
Sequence 2:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster


Alignment Length:862 Identity:288/862 - (33%)
Similarity:445/862 - (51%) Gaps:143/862 - (16%)


- Green bases have known domain annotations that are detailed below.


Human    10 GKADFVLMDTVSMPEFMANLRLRF-EKGRIYTFIGEVVVSVNPYKLLNIYGRDTIEQYKGRELYE 73
            |:.|...:..:..|..:.|||:|| |:..|||:.|.::|::|||..:.:||...|..|:|..:.:
  Fly    71 GQNDLTTLSYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMPLYGPSIIRAYRGHAMGD 135

Human    74 RPPHLFAIADAAYKAMKRRSKDTCIVISGESGAGKTEASKYIMQYIAAITNPSQRAEVERVKNML 138
            ..||:||:|:.||..::|.:.:..|::|||||||||.::||.|:|.||:.......:|||   .:
  Fly   136 LEPHIFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAVGGSESETQVER---KV 197

Human   139 LKSNCVLEAFGNAKTNRNDNSSRFGKYMDINFDFKGDPI---GGHINNYLLEKSRVIVQQPGERS 200
            |.|:.::||||||||.||||||||||:..:.|..:...:   |..::.||||||||:.|..|||:
  Fly   198 LASSPIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQGERN 262

Human   201 FHSFYQLLQGGSEQMLRSLHLQKSLSSYNYIHV-GAQLKSSINDAAEFRVVADAMKVIGFKPEEI 264
            :|.||||....|:.....|..|   ..:.:::: ||.....::||.:|.....||.|:||..::|
  Fly   263 YHIFYQLCAARSKYPELVLDHQ---DKFQFLNMGGAPEIERVSDAEQFNETVQAMTVLGFSIQQI 324

Human   265 QTVYKILAAILHLGNL----KF-----VVDGDT-PLIENGKVVSIIAELLSTKTDMVEKALLYRT 319
            ..:.||||.||||||:    ||     ..|.|: .:..|...:.|.|:||....|.:.:.||.|.
  Fly   325 ADIVKILAGILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIHLQITADLLRVSADDLRRWLLMRK 389

Human   320 VATGRDIIDKQHTEQEASYGRDAFAKAIYERLFCWIVTRINDIIEVKNYDTTIHGKN--TVIGVL 382
            :.:..:.:...::.:.|...|||.||.||.:||.:||..:|..:.        :|..  :.||||
  Fly   390 IESVNEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSLN--------NGSKQCSFIGVL 446

Human   383 DIYGFEIFDNNSFEQFCINYCNEKLQQLFIQLVLKQEQEEYQREGIPWKHIDYFNNQIIVDLVEQ 447
            ||||||.|:.||||||||||.||||||.|.|.|.|.|||||.:|||.|..||:::||..:||:|.
  Fly   447 DIYGFETFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDFYDNQPCIDLIES 511

Human   448 QHKGIIAILDDACMNVGKVTDEMFLEALNSKLGKHAHFSSRKLCASDKILEFDRDFRIRHYAGDV 512
            : .|::.:||:.| .:.|.:||.:...|..|..|..||...:...:        .|.|:|::..|
  Fly   512 R-LGVLDLLDEEC-RMPKGSDESWAGKLIGKCNKFPHFEKPRFGTT--------SFFIKHFSDTV 566

Human   513 VYSVIGFIDKNKDTLFQDFKRLMYNSSNPVLKNMWPEGKLSITEV-------------------- 557
            .|.|.||::||:||:.::..:::..|:..:.|.:     :::.|:                    
  Fly   567 EYDVNGFLEKNRDTVSKELTQVLSESNMSLAKQV-----MTLEEIDTLCVDSAKSSTLGGRVVIS 626

Human   558 ---------TKRPL--------TAATLFKNSMIALVDNLASKEPYYVRCIKPNDKKSPQIFDDER 605
                     |:|.:        |..:.|:.|:.:|:..|.:..|:|||||||||.|....::..:
  Fly   627 AGRKQQGNDTRRRVVPSKQHRKTVGSQFQESLASLISTLHATTPHYVRCIKPNDDKVAFKWETAK 691

Human   606 CRHQVEYLGLLENVRVRRAGFAFRQTYEKFLHRYK-MISEFTWPNHDLP-SDKEAVKKLIERCGF 668
            ...|:...|:||.||:..|||..|..|..|..||: ::.......:|:. |.:..|.|.|:.   
  Fly   692 IIQQLRACGVLETVRISAAGFPSRWLYPDFYMRYQLLVYRSKLDKNDMKLSCRNIVMKWIQD--- 753

Human   669 QDDVAYGKTKIFIRTPRTLFTLEELRA----------QMLIR-------------IVLFLQKVWR 710
            :|...:|.|:||.|..:..| ||::||          |.::|             ::..:||..|
  Fly   754 EDKYRFGNTQIFFRAGQVAF-LEQVRANLRKKYITIVQSVVRRFVYRRQFLRIQKVINGIQKHAR 817

Human   711 GTLARMR---YKRTKAALTIIRYYR-----------RYKVKSYIHEVAR------RFHGVKTMRD 755
            |.|||.|   .:..:|.|.:.:|.|           |:.: |.|...||      :||   .|||
  Fly   818 GYLARERTQKMREARAGLILSKYARGWLCRRRYLRLRHSI-SGIQTYARGMLARNKFH---AMRD 878

Human   756 YGKHVKWPSPPKVLRRF 772
            :.:.|:       ::||
  Fly   879 HYRAVQ-------IQRF 888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYO1DNP_056009.1 MYSc 4..694 CDD:214580 259/739 (35%)
MYSc_Myo1 24..682 CDD:276829 252/713 (35%)
Actin-binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU00782 572..594 10/21 (48%)
Myosin_TH1 803..997 CDD:283635
didumNP_724569.1 MYSc 65..778 CDD:214580 259/739 (35%)
MYSc_Myo5 84..767 CDD:276831 253/714 (35%)
IQ 900..922 CDD:197470
GBP_C <971..1086 CDD:303769
coiled coil 1049..1068 CDD:293879
coiled coil 1077..1086 CDD:293879
JAKMIP_CC3 <1190..1299 CDD:292653
Myo5_CBD 1424..1792 CDD:271254
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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