DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MYO1D and ck

DIOPT Version :10

Sequence 1:NP_056009.1 Gene:MYO1D / 4642 HGNCID:7598 Length:1006 Species:Homo sapiens
Sequence 2:NP_523571.1 Gene:ck / 34882 FlyBaseID:FBgn0000317 Length:2167 Species:Drosophila melanogaster


Alignment Length:1095 Identity:361/1095 - (32%)
Similarity:539/1095 - (49%) Gaps:191/1095 - (17%)


- Green bases have known domain annotations that are detailed below.


Human    10 GKADFVLMDTVSMPEFMANLRLRFEKGRIYTFIGEVVVSVNPYKLLNIYGRDTIEQYKGRELYER 74
            |..|.:.:..:.....:.||.:|:::..|||:.|.::|:||||::|.||..|.|:.||.|::.|.
  Fly    64 GVEDMISLGDLHEAGILRNLLIRYKENLIYTYTGSILVAVNPYQILPIYTGDQIKLYKERKIGEL 128

Human    75 PPHLFAIADAAYKAMKRRSKDTCIVISGESGAGKTEASKYIMQYIAAITNPSQRAEVERVKNMLL 139
            |||:|||.|.||..|||..:|.||||||||||||||::|.|:||:|||:     .:...::..:|
  Fly   129 PPHIFAIGDNAYAHMKRYRQDQCIVISGESGAGKTESTKLILQYLAAIS-----GKHSWIEQQIL 188

Human   140 KSNCVLEAFGNAKTNRNDNSSRFGKYMDINFDFKGDPIGGHINNYLLEKSRVIVQQPGERSFHSF 204
            ::|.:|||||||||.|||||||||||:||:|...|...|..|..|||||||::.|...||::|.|
  Fly   189 EANPILEAFGNAKTIRNDNSSRFGKYIDIHFSANGVIEGAKIEQYLLEKSRIVSQNHSERNYHVF 253

Human   205 YQLLQGGSEQMLRSLHLQKSLSSYNYIHVGAQLK-SSINDAAEFRVVADAMKVIGFKPEEIQTVY 268
            |.:|.|.|......|.|..: :.|.|:..|..:. ...:|||||..:..||||:.|..:||..:.
  Fly   254 YCILAGLSADEKSRLDLGMA-ADYKYLTGGNSITCEGRDDAAEFSDIRSAMKVLLFSDQEIWEII 317

Human   269 KILAAILHLGNLKF---VVDG-DTPLIENGKVVSIIAELLSTKTDMVEKALLYRTV-ATGRDIID 328
            |:|||:||.||:|:   |||. |...|.....|..:|.||......:..||..||: |.|..::.
  Fly   318 KLLAALLHCGNIKYKATVVDNLDATEIPEHINVERVAGLLGLPIQPLIDALTRRTLFAHGETVVS 382

Human   329 KQHTEQEASYGRDAFAKAIYERLFCWIVTRINDIIEVKNYDTTIHGKNTVIGVLDIYGFEIFDNN 393
            ....:|.... ||||.|.||.|:|..||.:||..| .|...|:    ...||||||:|||.||.|
  Fly   383 TLSRDQSVDV-RDAFVKGIYGRMFVHIVRKINTAI-FKPRGTS----RNAIGVLDIFGFENFDQN 441

Human   394 SFEQFCINYCNEKLQQLFIQLVLKQEQEEYQREGIPWKHIDYFNNQIIVDLVEQQHKGIIAILDD 458
            |||||||||.||.|||.|:|.:.|.|||||..|.|.|:||::.:||..:||:..:...|:|::|:
  Fly   442 SFEQFCINYANENLQQFFVQHIFKLEQEEYNHEAINWQHIEFVDNQDALDLIAIKQLNIMALIDE 506

Human   459 ACMNVGKVTDEMFLEALNSKLGKHAHFSSRKLCASDKILEFDRDFRIRHYAGDVVYSVIGFIDKN 523
            .. ...|.||:..|..|:...|.|.::...|   ||    .:..|.:.|:||.|.|...||:|||
  Fly   507 EA-RFPKGTDQTMLAKLHKTHGSHKNYLKPK---SD----INTSFGLNHFAGVVFYDTRGFLDKN 563

Human   524 KDTLFQDFKRLMYNSSNPVLKNMWPEGKLSITEVTKRPLTAATLFKNSMIALVDNLASKEPYYVR 588
            :||...|...|:..|:|..|:.::.:......|..||..|.:|.|:.|:.||:..|:|.:|:::|
  Fly   564 RDTFSPDLLHLVSQSTNKFLRQIFAQDIEMGAETRKRTPTLSTQFRKSLDALMKTLSSCQPFFIR 628

Human   589 CIKPNDKKSPQIFDDERCRHQVEYLGLLENVRVRRAGFAFRQTYEKFLHRYKMISEFTWPNHDLP 653
            |||||:.|.|.:||...|..|:.|.|::|.:|:||||:..|..:.:|:.||:.:.....|.|  .
  Fly   629 CIKPNELKKPMMFDRGLCCRQLRYSGMMETIRIRRAGYPIRHGFREFVERYRFLIPGVPPAH--R 691

Human   654 SDKEAVKKLIERCGF---QDDVAYGKTKIFIRTPRTLFTLEELRAQMLIRIVLFLQKVWRGTLAR 715
            :|.:|....|  |..   :.|...|.||:|::....|| ||:.|.::|.|.:|.||:..||.:.|
  Fly   692 TDCQAATSRI--CAVVLGKSDYQLGHTKVFLKDAHDLF-LEQERDRVLTRKILILQRSIRGWVYR 753

Human   716 MRYKRTK-AALTIIRYY------RRYK------------VKSYI----------HEVARRFH--G 749
            .|:.|.: ||:|:.|::      :||:            ::|.:          |.|..:.|  |
  Fly   754 RRFLRLRAAAITVQRFWKGYAQRKRYRNMRVGYMRLQALIRSRVLSHRFRHLRGHIVGLQAHARG 818

Human   750 VKTMRDYGKHVKWPSPPKV----------------------------LRRFEEALQTIFNRW--R 784
            ....|:|| |..| :..|:                            ||:.||  |.:.:|.  .
  Fly   819 YLVRREYG-HKMW-AVIKIQSHVRRMIAMRRYRKLRLEHKQFAEVLQLRKLEE--QELLHRGNKH 879

Human   785 ASQLIKSIPASDLPQVRAKVAAVEMLKGQRADLGLQRAWEGNYLASKPDTPQTSG-------TFV 842
            |.::.:......|.::..:....::...:|.::.:...   |..|.|.:.|...|       .|:
  Fly   880 AREIAEQHYRDRLHELERREIQEQLENRRRVEVNMNII---NDAARKQEEPVDDGKLVEAMFDFL 941

Human   843 P----------------VANELKRKDKYMNVLFSCHVRKVNRFSKV---------EDRAIFVTDR 882
            |                |.|:|.            |.:.||:...:         ||.:.|...:
  Fly   942 PDSSSDAPTPHGGRETSVFNDLP------------HAQNVNQDDIIAPIHISEDEEDLSEFKFQK 994

Human   883 H---LYKMDPTKQY--KVMK--TIPLYNLTGLSVSNGKDQLVV------------------FHTK 922
            .   .::.:...||  |.:|  .:||:       :.| |||..                  :||.
  Fly   995 FAATYFQGNVNHQYAKKALKHPLLPLH-------TQG-DQLAAQALWITILRFTGDMPEPKYHTM 1051

Human   923 DNKDLIVCLFSKQPT--------HESRIGELVGVLVNHFKSEK----RHLQVNVT 965
            |..|....:.....|        .|.:..:|:|:..:.|..:|    ||..|::|
  Fly  1052 DRMDTTSVMSKVTATLGRNFIRSKEFQEAQLMGLDPDAFLKQKPRSIRHKLVSLT 1106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYO1DNP_056009.1 MYSc_Myo1 24..682 CDD:276829 278/666 (42%)
Actin-binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU00782 572..594 10/21 (48%)
Myosin_TH1 803..996 CDD:461801 41/232 (18%)
ckNP_523571.1 MYSc_Myo7 77..721 CDD:276832 278/667 (42%)
MyTH4 <1138..1245 CDD:214535
FERM1_F1_Myosin-VII 1249..1347 CDD:340612
B41 1251..1467 CDD:214604
FERM_C1_MyoVII 1461..1559 CDD:270019
SH3 1560..1624 CDD:473055
MyTH4 1701..1849 CDD:214535
FERM2_F1_Myosin-VII 1854..1951 CDD:340613
B41 1856..2068 CDD:214604
FERM_C2_MyoVII 2064..2159 CDD:270020
Blue background indicates that the domain is not in the aligned region.

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