DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1HCH and RGD1560687

DIOPT Version :9

Sequence 1:NP_001263104.1 Gene:Fer1HCH / 46415 FlyBaseID:FBgn0015222 Length:245 Species:Drosophila melanogaster
Sequence 2:XP_038935980.1 Gene:RGD1560687 / 500804 RGDID:1560687 Length:183 Species:Rattus norvegicus


Alignment Length:176 Identity:44/176 - (25%)
Similarity:85/176 - (48%) Gaps:26/176 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 QIQEEIN--------ASYQYLAMGAYFSRDTVNRPGFAEHFFKAAKEEREHGSKLVEYLSMRGQL 144
            :::..:|        |||.||::|.:|.||.|...|.. |||:...||:..|::  ..|.::.:|
  Rat    12 EVEAAVNRLVNLHPRASYTYLSLGFFFDRDDVALEGVG-HFFRELAEEKREGAQ--RLLKLQNEL 73

  Fly   145 TEGVSDLINVPTVAKQEWTDGAAALSDALDLEIKVTKSIRKL--IQTCENKPYNHYHLVDYLTGV 207
             .|.:...:|...::.||.....|:..||.||..:.:::..|  :.:....|    ||.|:|...
  Rat    74 -GGRALFQDVQKPSQDEWGKTLEAMEAALALEKNLNQALLDLHALGSARTDP----HLCDFLERH 133

  Fly   208 YLEEQLHGQRELAGKLTTLKKMMD--------TNGELGEFLFDKTL 245
            :|::::...:::...||.|:::..        ....|||:||::.:
  Rat   134 FLDKEVKLSKKMGNHLTNLRRVAGPQPAQTGVAQASLGEYLFERLI 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1HCHNP_001263104.1 Euk_Ferritin 79..243 CDD:153114 44/172 (26%)
Ferritin 82..229 CDD:278632 39/150 (26%)
RGD1560687XP_038935980.1 Ferritin 10..177 CDD:153098 44/172 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000169
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11431
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X152
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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