DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MYO1A and MYO5

DIOPT Version :9

Sequence 1:NP_001242970.1 Gene:MYO1A / 4640 HGNCID:7595 Length:1043 Species:Homo sapiens
Sequence 2:NP_013827.1 Gene:MYO5 / 855136 SGDID:S000004715 Length:1219 Species:Saccharomyces cerevisiae


Alignment Length:1083 Identity:348/1083 - (32%)
Similarity:538/1083 - (49%) Gaps:199/1083 - (18%)


- Green bases have known domain annotations that are detailed below.


Human     8 VGVEDLVLLEPLVEESLLKNLQLRYENKEIYTYIGNVVISVNPYQQLPIYGPEFIAKYQDYTFYE 72
            |||.||.||..:.:|::.:||:.|:.|..||||||:|:|||||::.|.||....:.:|:.....|
Yeast    36 VGVSDLTLLSKISDEAINENLKKRFLNATIYTYIGHVLISVNPFRDLGIYTDAVMNEYKGKNRLE 100

Human    73 LKPHIYALANVAYQSLRDRDRDQCILITGESGSGKTEASKLVMSYVAAVCG-KGEQVNSVKEQLL 136
            :.||::|:|...|.:::..:.:||::|:||||:|||||:|.:|.|:||... ..|.:..:|:.:|
Yeast   101 VPPHVFAIAESMYYNMKSYNENQCVIISGESGAGKTEAAKRIMQYIAAASSTHTESIGKIKDMVL 165

Human   137 QSNPVLEAFGNAKTIRNNNSSRFGKYMDIEFDFKGSPLGGVITNYLLEKSRLVKQLKGERNFHIF 201
            .:||:||:||.|||:|||||||.|||::|:|:.:..|..|.||||||||.|:|.|:|.|||||||
Yeast   166 ATNPLLESFGCAKTLRNNNSSRHGKYLEIKFNNQFEPCAGNITNYLLEKQRVVSQIKNERNFHIF 230

Human   202 YQLLAGADEQLLKALKLERDTTGYAY------LNHEVSRVDGMDDASSFRAVQSAMAVIGFSEEE 260
            ||...||.:...:...:::... |.|      ::.|.     :||...::....||.|||..:||
Yeast   231 YQFTKGASDAYRQTFGVQKPEQ-YVYTAAAGCISAET-----IDDLQDYQETLKAMRVIGLGQEE 289

Human   261 IRQVLEVTSMVLKLGNVLVADEFQASGIPASGIRDGRGVREIGEMVGLNSEEVERALCSRTMET- 324
            ..|:..:.:.:|.:|||...:..:.:    :.:||......:..::.::|:.:.::|..|.||| 
Yeast   290 QDQIFRMLAAILWIGNVSFIENEEGN----AQVRDTSVTDFVAYLLQIDSQLLIKSLVERIMETN 350

Human   325 --AKEKVV--TALNVMQAQYARDALAKNIYSRLFDWIVNRINESIKVGIGEKKKVMGVLDIYGFE 385
              .|...|  ..||::||...||||||.||:.||||||:|:|:|::...|.:|.: |:|||||||
Yeast   351 HGMKRGSVYHVPLNIVQADAVRDALAKAIYNNLFDWIVSRVNKSLQAFPGAEKSI-GILDIYGFE 414

Human   386 ILEDNSFEQFVINYCNEKLQQVFIEMTLKEEQEEYKREGIPWTKVDYFDNGIICKLIE-HNQRGI 449
            |.|.|||||..|||.||||||:||::|||.|||.|:||.|.||.:.||||.::|.||| ....||
Yeast   415 IFEHNSFEQICINYVNEKLQQIFIQLTLKSEQETYEREKIQWTPIKYFDNKVVCDLIEARRPPGI 479

Human   450 LAMLDEECLRPGV---VSDSTFLAKLNQLFSKHGHYESKVTQNAQRQYDHTMGLSCFRICHYAGK 511
            .|.:::.......   .:|..|..:|| ||:.:.|::.:..:              |.|.||||.
Yeast   480 FAAMNDSVATAHADSNAADQAFAQRLN-LFTTNPHFDLRSNK--------------FVIKHYAGD 529

Human   512 VTYNVTSFIDKNNDLLFRDLLQAMWKAQHPLLRSLFPEGNPKQASLKRPPTAGAQFKSSVAILMK 576
            |||::....|||.|.|.:||::.:....:..|.::||:...:: |.:||||||.:...|...|::
Yeast   530 VTYDIDGITDKNKDQLQKDLVELIGTTTNTFLATIFPDTVDRE-SKRRPPTAGDKIIKSANDLVE 593

Human   577 NLYSKSPNYIRCIKPNEHQQRGQFSSDLVATQARYLGLLENVRVRRAGYAHRQGYGPFLERYRLL 641
            .|....|:|||.|||||.:....:....|..|.:||||.||||:||||:|:||.:..|:||:.||
Yeast   594 TLSKAQPSYIRTIKPNETKSPNDYDDRQVLHQIKYLGLQENVRIRRAGFAYRQVFEKFVERFYLL 658

Human   642 SRSTWPH--------WNGGDREGVEKVLGELSMSSGELAFGKTKIFIRSPKTLFYLEEQRRLRLQ 698
            |    ||        |.|...:.|:.:|.:.|:...|...|.|.:||::|:|||.||..|.....
Yeast   659 S----PHCSYAGDYTWQGDTLDAVKYILQDSSIPQQEYQLGVTSVFIKTPETLFALEHMRDRYWH 719

Human   699 QLATLIQKIYRGWRCRTHYQLMRKSQILISSWFRGNMQKKCYGKIKASVLLIQAFVRGWKARKNY 763
            .:|..||:.:|.:                       :|::.....|     ||..:|..|....|
Yeast   720 NMAARIQRAWRRF-----------------------LQRRIDAATK-----IQRTIRERKEGNKY 756

Human   764 RKYFRSEAALTLADFIYKSMVQKFLLGLKNNLPSTNVLDKTWPAAPYKCLSTANQELQQLFYQWK 828
            .|         |.|:..|      :||.:....|.::|.       |:..               
Yeast   757 EK---------LRDYGTK------VLGGRKERRSMSLLG-------YRAF--------------- 784

Human   829 CKRFRDQLSPKQVEILREKLCASELFKG----KKASYPQSVPIPFCGDYIGLQGNPKLQKLKGGE 889
               ..|.||           |.....||    ::.|..:.|.....|:.:..:.....|:||   
Yeast   785 ---MGDYLS-----------CNESKSKGAYIKRQVSIKEKVIFSIHGEALHTKFGRSAQRLK--- 832

Human   890 EGPVLMAEAVKKVNRGNGKTSSRILLLTK------GHVILTDTKKSQAKIVIGLDNVAGVSVTSL 948
                                  :..|||.      |..::.:.........|.:.|:..||:|:|
Yeast   833 ----------------------KTFLLTPTTLYIVGQTLVQNAMTYTQDYKIDVRNIQAVSLTNL 875

Human   949 KDGLFSLHLSEMSSVGSKGDFLLVSEHVIELLTKMYR-------------------AVLDATQRQ 994
            :|...::.|:.    ..:.|.|:.:....||:|.:.|                   ..|.:.:.|
Yeast   876 QDDWVAIKLAS----SGQPDPLINTYFKTELITHLKRLNDKIQIKIGSAIEYQKKPGKLHSVKCQ 936

Human   995 LTVTVTEKFSVRFKENSVAVKVVQGPAGGDNSKLRYK--KKGS 1035
            :..: ..|:...:|.::::|:....|    ||::..|  ||.|
Yeast   937 INES-APKYGDIYKSSTISVRRGNPP----NSQVHKKPRKKSS 974

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYO1ANP_001242970.1 MYSc 8..694 CDD:214580 285/709 (40%)
MYSc_Myo1 22..681 CDD:276829 271/682 (40%)
Actin-binding. /evidence=ECO:0000255 571..593 9/21 (43%)
IQ 742..764 CDD:197470 5/21 (24%)
Myosin_TH1 847..1021 CDD:283635 32/202 (16%)
MYO5NP_013827.1 COG5022 1..1186 CDD:227355 348/1083 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000187
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100187
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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