DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MYO1A and ck

DIOPT Version :9

Sequence 1:NP_001242970.1 Gene:MYO1A / 4640 HGNCID:7595 Length:1043 Species:Homo sapiens
Sequence 2:NP_001285949.1 Gene:ck / 34882 FlyBaseID:FBgn0000317 Length:2167 Species:Drosophila melanogaster


Alignment Length:757 Identity:300/757 - (39%)
Similarity:442/757 - (58%) Gaps:36/757 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     9 GVEDLVLLEPLVEESLLKNLQLRYENKEIYTYIGNVVISVNPYQQLPIYGPEFIAKYQDYTFYEL 73
            ||||::.|..|.|..:|:||.:||:...||||.|:::::|||||.||||..:.|..|::....||
  Fly    64 GVEDMISLGDLHEAGILRNLLIRYKENLIYTYTGSILVAVNPYQILPIYTGDQIKLYKERKIGEL 128

Human    74 KPHIYALANVAYQSLRDRDRDQCILITGESGSGKTEASKLVMSYVAAVCGKGEQVNSVKEQLLQS 138
            .|||:|:.:.||..::...:||||:|:||||:||||::||::.|:||:.||.   :.:::|:|::
  Fly   129 PPHIFAIGDNAYAHMKRYRQDQCIVISGESGAGKTESTKLILQYLAAISGKH---SWIEQQILEA 190

Human   139 NPVLEAFGNAKTIRNNNSSRFGKYMDIEFDFKGSPLGGVITNYLLEKSRLVKQLKGERNFHIFYQ 203
            ||:||||||||||||:||||||||:||.|...|...|..|..|||||||:|.|...|||:|:||.
  Fly   191 NPILEAFGNAKTIRNDNSSRFGKYIDIHFSANGVIEGAKIEQYLLEKSRIVSQNHSERNYHVFYC 255

Human   204 LLAG--ADEQLLKALKLERDTTGYAYLNHEVS-RVDGMDDASSFRAVQSAMAVIGFSEEEIRQVL 265
            :|||  |||:....|.:..|   |.||....| ..:|.|||:.|..::|||.|:.||::||.:::
  Fly   256 ILAGLSADEKSRLDLGMAAD---YKYLTGGNSITCEGRDDAAEFSDIRSAMKVLLFSDQEIWEII 317

Human   266 EVTSMVLKLGNV----LVADEFQASGIPASGIRDGRGVREIGEMVGLNSEEVERALCSRTMETAK 326
            ::.:.:|..||:    .|.|...|:.||     :...|..:..::||..:.:..||..||:....
  Fly   318 KLLAALLHCGNIKYKATVVDNLDATEIP-----EHINVERVAGLLGLPIQPLIDALTRRTLFAHG 377

Human   327 EKVVTALNVMQAQYARDALAKNIYSRLFDWIVNRINESIKVGIGEKKKVMGVLDIYGFEILEDNS 391
            |.||:.|:..|:...|||..|.||.|:|..||.:||.:|....|..:..:|||||:|||..:.||
  Fly   378 ETVVSTLSRDQSVDVRDAFVKGIYGRMFVHIVRKINTAIFKPRGTSRNAIGVLDIFGFENFDQNS 442

Human   392 FEQFVINYCNEKLQQVFIEMTLKEEQEEYKREGIPWTKVDYFDNGIICKLIEHNQRGILAMLDEE 456
            ||||.|||.||.|||.|::...|.|||||..|.|.|..:::.||.....||...|..|:|::|||
  Fly   443 FEQFCINYANENLQQFFVQHIFKLEQEEYNHEAINWQHIEFVDNQDALDLIAIKQLNIMALIDEE 507

Human   457 CLRP-GVVSDSTFLAKLNQLFSKHGHY-ESKVTQNAQRQYDHTMGLSCFRICHYAGKVTYNVTSF 519
            ...| |  :|.|.||||::....|.:| :.|...|           :.|.:.|:||.|.|:...|
  Fly   508 ARFPKG--TDQTMLAKLHKTHGSHKNYLKPKSDIN-----------TSFGLNHFAGVVFYDTRGF 559

Human   520 IDKNNDLLFRDLLQAMWKAQHPLLRSLFPEGNPKQA-SLKRPPTAGAQFKSSVAILMKNLYSKSP 583
            :|||.|....|||..:.::.:..||.:|.:.....| :.||.||...||:.|:..|||.|.|..|
  Fly   560 LDKNRDTFSPDLLHLVSQSTNKFLRQIFAQDIEMGAETRKRTPTLSTQFRKSLDALMKTLSSCQP 624

Human   584 NYIRCIKPNEHQQRGQFSSDLVATQARYLGLLENVRVRRAGYAHRQGYGPFLERYRLLSRSTWPH 648
            .:||||||||.::...|...|...|.||.|::|.:|:|||||..|.|:..|:||||.|.... |.
  Fly   625 FFIRCIKPNELKKPMMFDRGLCCRQLRYSGMMETIRIRRAGYPIRHGFREFVERYRFLIPGV-PP 688

Human   649 WNGGDREGVEKVLGELSMSSGELAFGKTKIFIRSPKTLFYLEEQRRLRLQQLATLIQKIYRGWRC 713
            .:..|.:.....:..:.:...:...|.||:|::....|| ||::|...|.:...::|:..|||..
  Fly   689 AHRTDCQAATSRICAVVLGKSDYQLGHTKVFLKDAHDLF-LEQERDRVLTRKILILQRSIRGWVY 752

Human   714 RTHYQLMRKSQILISSWFRGNMQKKCYGKIKASVLLIQAFVR 755
            |..:..:|.:.|.:..:::|..|:|.|..::...:.:||.:|
  Fly   753 RRRFLRLRAAAITVQRFWKGYAQRKRYRNMRVGYMRLQALIR 794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYO1ANP_001242970.1 MYSc 8..694 CDD:214580 284/694 (41%)
MYSc_Myo1 22..681 CDD:276829 273/668 (41%)
Actin-binding. /evidence=ECO:0000255 571..593 12/21 (57%)
IQ 742..764 CDD:197470 3/14 (21%)
Myosin_TH1 847..1021 CDD:283635
ckNP_001285949.1 MYSc 64..733 CDD:214580 284/694 (41%)
MYSc_Myo7 77..721 CDD:276832 273/668 (41%)
MyTH4 <1138..1245 CDD:214535
B41 1251..1467 CDD:214604
FERM_B-lobe 1355..1439 CDD:271216
FERM_C1_MyoVII 1461..1559 CDD:270019
SH3 1560..1624 CDD:302595
MyTH4 1701..1849 CDD:214535
B41 1856..2068 CDD:214604
FERM_M 1966..2068 CDD:278785
FERM_C2_MyoVII 2064..2159 CDD:270020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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