DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11899 and serC

DIOPT Version :10

Sequence 1:NP_652046.1 Gene:CG11899 / 46391 FlyBaseID:FBgn0014427 Length:364 Species:Drosophila melanogaster
Sequence 2:NP_415427.1 Gene:serC / 945527 ECOCYCID:EG10946 Length:362 Species:Escherichia coli


Alignment Length:368 Identity:185/368 - (50%)
Similarity:246/368 - (66%) Gaps:17/368 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VINFAAGPAKLPEEVLKEVQENLVNCNGSGISVMEMSHRSSNYAKIHDATISDLRELLNVPSNYK 66
            :.||::|||.||.||||:.|:.|.:.||.|.||||:|||...:.::.:....|.|:|||||||||
E. coli     4 IFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYK 68

  Fly    67 ILLMQGGGTGQFAAVALNLIGKTGTADYVITGSWSAKAAKEAAQYGTVNAVLPKLAKYTTV---- 127
            :|...|||.||||||.||::|...|||||..|.|:|.|.|||.:|.|.|....|:    ||    
E. coli    69 VLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKV----TVDGLR 129

  Fly   128 ---PRQETWKLDPNASYVYYCDNETVEGVEFDFVPEVPAGVPLVADMSSNFLSRPFDVSKFGVIY 189
               |.:| |:|..||:|::||.|||::|:..|..|:..|.|.:.||.||..||||.|||::||||
E. coli   130 AVKPMRE-WQLSDNAAYMHYCPNETIDGIAIDETPDFGADVVVAADFSSTILSRPIDVSRYGVIY 193

  Fly   190 AGAQKNIGPAGTTVIIVRDDLIGKHLKITPSILNFEQMDKNNSLLNTPPTFGIYVMGLVFKWIKR 254
            |||||||||||.|::|||:||:||.....||||::..::.|.|:.||||||..|:.||||||:|.
E. coli   194 AGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKA 258

  Fly   255 NGGVAGMAKLAAAKSKLIYDTINQSNGFYYCPVDVNVRSRMNVPFRIGSASGDDALEKEFLSKAE 319
            |||||.|.|:...|::|:|..|:.|: ||...|....||||||||::    .|.||:|.||.::.
E. coli   259 NGGVAEMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQL----ADSALDKLFLEESF 318

  Fly   320 AEGMIQLKGHRSVGGIRASLYNAVTLAETQQLANLMLAFYKNN 362
            |.|:..|||||.|||:|||:|||:.|...:.|.:.|:.|.:.:
E. coli   319 AAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11899NP_652046.1 PSAT_like 3..360 CDD:99736 185/363 (51%)
serCNP_415427.1 PRK05355 1..362 CDD:235428 185/368 (50%)

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