DRSC/TRiP Functional Genomics Resources

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Protein Alignment MYH11 and Myo28B1

DIOPT Version :10

Sequence 1:NP_001035203.1 Gene:MYH11 / 4629 HGNCID:7569 Length:1979 Species:Homo sapiens
Sequence 2:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster


Alignment Length:1971 Identity:500/1971 - (25%)
Similarity:850/1971 - (43%) Gaps:403/1971 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    36 VWVPSEKQ------GFEAASIKEEKGDEVVVELVENGKKVTVGKDDIQK-MNPPKFSKVEDMAEL 93
            |||..:..      .|.|..::.||...:|.:  :..|:..|...|:.| |:......||||..|
  Fly    13 VWVKPQNTTSEFAVPFGARIVRTEKTQTLVCD--DRNKQFWVPAGDVLKAMHITSQEDVEDMITL 75

Human    94 TCLNEASVLHNLRERYFSGLIYTYSGLFCVVVNPYKHLPIYSEKIVDMYKGKKRHEMPPHIYAIA 158
            ..|.|.::|.||:.||...|||||:|...|.:|||:.||||:.:.:.:|:.|...|:||||:||:
  Fly    76 GDLQEYTILRNLQNRYAKQLIYTYTGSMLVAINPYQILPIYTNREIQLYRNKSLAELPPHIFAIS 140

Human   159 DTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSFAYGELEK 223
            |.|::.:.:.:|:|.::.:|||||||||:||.::||||.::..|..                :|:
  Fly   141 DNAFQRLQRLKENQCVVISGESGAGKTESTKLILQYLAAISGKHSW----------------IEQ 189

Human   224 QLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQARDERTF 288
            |:::||||:|||||||||:|||||||||:|.|.|...|.|.||.|:.|||||||.:.|:||||.:
  Fly   190 QIIEANPIMEAFGNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIVFQSRDERNY 254

Human   289 HIFYYMIAG--AKEKMRSDLLLEGFNNYTFLS-NGFVPIPAAQDDEMFQETVEAMAIMGFSEEEQ 350
            ||||.|:||  ..|:.|..|..:..:.|.:|: .|...:|...|.:.|.:...||.::.|..||.
  Fly   255 HIFYCMLAGLSTAERERLKLQEQSPSQYHYLAQGGCFTLPGRGDAKDFADIRAAMKVLSFKPEEV 319

Human   351 LSILKVVSSVLQLGNIVF--KKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPRIKVGRD 413
            .|||.:::::|.|||:.|  .:..|...|.:.|....|:|..|:||.::....::....|.|..:
  Fly   320 WSILSLLAAILHLGNLRFTATEVANLATAEIDDTPNLQRVAQLLGIPISALNAALTQRTIFVHGE 384

Human   414 VVQKAQTKEQADFAVEALAKATYERLFRWILTRVNKALDKTHRQGASFLGILDIAGFEIFEVNSF 478
            .|..:.:||.|....:|..|:.|:.:|..|:.|:|:.::|...|..:.:|:|||.|||.|:.|||
  Fly   385 HVTTSLSKEAAIEGRDAFVKSLYDGIFVRIVRRINETINKQVDQPMNSIGVLDIFGFENFDNNSF 449

Human   479 EQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPNNPPGVLALLD 543
            |||||||.||.|||.|...:|.:||:|||.|.|.|..|:| .|.|..::||..  .|..:::|:|
  Fly   450 EQLCINYANENLQQFFVGHIFKMEQDEYQNEHINWQHIEF-QDNQQILDLIGM--KPMNLMSLID 511

Human   544 EECWFPKATDKSFVEKLCTEQGSHPKFQKPKQLKDKTEFSIIHYAGKVDYNASAWLTKNMDPLND 608
            ||..|||.||::.:|||..:.|:...:.|.|..:... |.|.||||.|.||...:|.||.|..:.
  Fly   512 EESKFPKGTDQTLLEKLHVQHGNRSIYVKGKTTQTSL-FGIRHYAGVVMYNPLGFLEKNRDSFSG 575

Human   609 NVTSLLNASSDKFVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLGKLMT 673
            ::.:|:..|::|::.|::..              |..:.:|.|..     |:...::..|..||.
  Fly   576 DLRTLVQRSTNKYLVDIFPH--------------EMPMDTAKKQP-----TLCVKFRNSLDMLMR 621

Human   674 TLRNTTPNFVRCIIPNHEKRSGKLDAFLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEIL 738
            ||....|.|:|||.||..|.....|..|.:.|||.:|::|..||.|.|:|.|..::.|.:||.:|
  Fly   622 TLSQAHPYFIRCIKPNEYKEPKNFDKELCVRQLRYSGMMETARIRRAGYPIRHAYRAFVERYRLL 686

Human   739 AANAIPKGFMD----GKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIMA 799
            .....|....|    .:|.|.:   ||..|.: .:.|::|:|.|....|.||.:|...:...|:.
  Fly   687 VPPVGPLEQCDCRKLARQICEV---ALPADSD-RQYGKTKLFLRDEDDASLELQRSQLMLKSIVT 747

Human   800 FQAMCRGYLARKAFAKRQQQLTAMKVIQRNCAAYLKLRNWQWWRL-FTKVKPLL---QVTRQEEE 860
            .|...|..|.|: :.||.::  |:..:||.....|:.|.:|..|. |.::...:   |:|.:...
  Fly   748 IQRGIRRVLFRR-YMKRYRE--AIITVQRYWRGRLQRRKYQVMRQGFHRLGACIAAQQLTTKFTM 809

Human   861 MQAKEDELQKTKERQQKAENELKEL--EQKHSQLTEEKNLLQEQLQAETELYAEAEEMRVRLAAK 923
            ::.:..:||.........::..|:|  .:|.:||.:|: ||:                    .||
  Fly   810 VRCRTIKLQALSRGYLVRKDFQKKLLERRKQNQLKKEE-LLK--------------------LAK 853

Human   924 KQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIK 988
            .:|.||:|...:  |:|:::|.|:.|.|::      |..|::|:.|.|||..|.:..|..:.:.|
  Fly   854 MKEAEELLRLQQ--LKEQKEREQREQQEKR------LQEEQRLKAEAAARNALAMAAVQQKRRTK 910

Human   989 KLEDE------------------------------------ILVMDDQNNKLSKERKLLEERISD 1017
            .::.|                                    |..:.:....:..|..  ::.:.|
  Fly   911 PVKQEAPKAPTLQARNSLPPPPTTLIVAAPLPTRPASAVTRINTIPESPGTIDVESS--KQMVDD 973

Human  1018 LTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQE------LEKLKRKLEGDASDFHE 1076
            :...|.:|.:.|  |.||.|    :.|...:||.|...:..:      |:.......|.|:..||
  Fly   974 VFRFLNDEPDAA--LRKLNN----ISSGDTIRLPKSVPNNIDTSDFSYLKYAATYFGGGATAQHE 1032

Human  1077 QIADLQAQIAELKMQLAKKEEELQAALARLDDEIAQKNNALKKIRELEGHISDLQEDLDSERAAR 1141
            :        ..||..|.|.|..:        ||:|.|...|..:|    .:.||.:.:.|.....
  Fly  1033 R--------KPLKKSLLKHEHPI--------DEMASKAIWLTILR----FMGDLPDVVSSPTLHV 1077

Human  1142 NKAEKQKRDLGEELEALKTELEDTLDSTATQQELRAKREQEVTVLKKALDEETRSHEAQVQEMRQ 1206
            ...|....||        ..|.:|.||...:..:|..        ::.:.:...|.|.:.||..|
  Fly  1078 FDNENLMSDL--------ASLLNTSDSYKPRLFVRQS--------QRRIPKPLASGEKEAQEFYQ 1126

Human  1207 -------KHAQAV--------------EELTEQLEQFKRAKANLDKNKQTLEKENADLAGELRVL 1250
                   .|.:.:              :|:..|:.:    :..|:.::.:..:....|:..|...
  Fly  1127 HWLNVPTSHLEKIHFIIGHGIIKNSLRDEILAQICK----QLYLNPSRSSYSRGWLLLSLCLSCF 1187

Human  1251 GQAKQEVEHKKK-------KLEA--QVQELQSKCSDGERARAELNDKVHKLQN------EVESVT 1300
            ..:|:...|.:.       :|:|  .:|.|:....:|.|.:.....::|.::.      ::..:.
  Fly  1188 PPSKEFEPHLRSFMKQGTAQLQATPSLQRLERTLVNGPRCQPPSLFELHAIRGRHPLRLDIHLMD 1252

Human  1301 GMLNEAEGKAIKLAKD-------------------VASLSSQL-------QDTQELLQEETRQKL 1339
            |.....:..|...|::                   |.||:.:|       :...:.:.|..:::|
  Fly  1253 GQQRRLQVDAASTAREAVNQLCQGMGLTDTFGFGLVMSLNGKLMPLGAGQEHVLDAISECEQRQL 1317

Human  1340 NVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHISTLN-IQLSDSKKKLQDFASTVEAL----EE 1399
            :...||...:|   ......|..|:.|.....:...|| ::..:.:.:.:...:.|.||    |.
  Fly  1318 DAPWKLYIRKE---MFATWYDPSMDPKATQLIYKQILNGLKCGEYRCRSEKDIAMVCALACFVEY 1379

Human  1400 GKKRF--------------------QKEIENLTQQYEEKAAAYDKLEKTKNRLQQELDDLVVDLD 1444
            |....                    ::.|||.::..   ||.|:|    .:.:::|.:||:::..
  Fly  1380 GPGEILRLKPSEITAFVPSDLLAPGERAIENWSRLI---AATYEK----SSYVKEEQNDLLLEAQ 1437

Human  1445 NQRQ----LVSNLE---KKQRKFDQLLAEEKNISSK------------YADERDRAEAEAREKET 1490
            .:.:    |.::|.   :..|.|:.:..|...:.|.            ..||.::..|       
  Fly  1438 KRAKEDICLFAHLSWPMRHSRLFEVVRKEGPKLQSDELMLGINSAGLFLIDETEQVLA------- 1495

Human  1491 KALSLARALEEALEAKEEL-----ERTNKMLKAEMEDLVSSKDDVGKNVHELEKSKR-------A 1543
             :...:..|:..:|:.::|     :..|.:|:.      ||..|..:.::.:..:.|       |
  Fly  1496 -SCCFSEVLKVHVESDDKLHVMTFQHVNFVLQC------SSAQDANEVINYMLDNLRQRSSYGVA 1553

Human  1544 LETQMEEMKTQLEELED----------ELQA-TEDAKLR-------------------LEVNMQA 1578
            |:..:|      .:|||          |.:| ...|:|.                   |..|::.
  Fly  1554 LDPVVE------GDLEDCLVLNPGDLIEFEAGVTGAQLMAGNAQDCYRGCVNGQWGQFLAGNVRV 1612

Human  1579 L---------------KGQFERDLQARDEQNEEKRRQLQ-RQLHE--YETELEDERKQRALAAAA 1625
            |               :|:|:...:.....|..:|||.. .||.|  :...|:.::  ..|:..:
  Fly  1613 LATLTKPSEKLQDILREGRFQEPPKPTPRANYSRRRQHNISQLAESHFREPLDSDK--APLSKFS 1675

Human  1626 KKKLEGDLKDLELQADSAIKGREEAIKQLRKLQAQMKDFQRELEDARASRDEIFATAKENEKKAK 1690
            .:.|:..|....::.....   ::|:.....:...|.|..|  .:...:.|.||..|.::.....
  Fly  1676 PEPLKAPLLKAVVKVPPLF---QQALVMHHHILKYMGDIAR--SNLPVNTDLIFQPALQHPLLCD 1735

Human  1691 SLEADLMQLQEDLAAAERARKQADL---------EKEELAEELASSLSGR-NALQDE-KRRLEAR 1744
            .|...||:...|..::|..::..||         ....:..||...|..| :||.|. .:||:..
  Fly  1736 ELYCQLMKQLSDNPSSESEKRGWDLLYLATGLVAPSVLVMRELIILLRMRADALADACLKRLKRS 1800

Human  1745 IAQLEEELEEEQGNMEAMSDR 1765
            :||.:.:.......:|.:..|
  Fly  1801 LAQGQRKKAPHLIEVEGIQQR 1821

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYH11NP_001035203.1 Myosin_N 31..76 CDD:460670 10/45 (22%)
MYSc_class_II 99..778 CDD:276951 260/687 (38%)
Actin-binding. /evidence=ECO:0000250 668..690 11/21 (52%)
Actin-binding. /evidence=ECO:0000250 769..783 4/13 (31%)
Myosin_tail_1 855..1935 CDD:460256 199/1132 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 865..889 4/25 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1751..1807 2/15 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1873..1979
C-terminal 1942..1979
Myo28B1NP_723294.1 MYSc_Myo7 81..726 CDD:276832 260/687 (38%)
IQ 765..785 CDD:197470 5/21 (24%)
Atrophin-1 <820..>946 CDD:460830 31/154 (20%)
MyTH4 1031..1239 CDD:470587 44/247 (18%)
FERM1_F1_Myosin-VII 1243..1334 CDD:340612 12/93 (13%)
B41 1248..1429 CDD:214604 29/190 (15%)
PH-like 1454..1547 CDD:473070 16/106 (15%)
MyTH4 1674..1819 CDD:214535 29/149 (19%)
FERM2_F1_Myosin-VII 1825..1919 CDD:340613
B41 1827..2032 CDD:214604
FERM_C2_MyoVII 2028..2121 CDD:270020
Blue background indicates that the domain is not in the aligned region.

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