DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-SGDH and Ndufb5

DIOPT Version :9

Sequence 1:NP_001261742.1 Gene:ND-SGDH / 46260 FlyBaseID:FBgn0011455 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001099896.1 Gene:Ndufb5 / 294964 RGDID:1305909 Length:189 Species:Rattus norvegicus


Alignment Length:127 Identity:65/127 - (51%)
Similarity:83/127 - (65%) Gaps:0/127 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 RMGGDHGHHQMIIKPSRFQWDKFKDLLHFYVMLGVIPVTALVLYANIFVGPAQLAEIPEGYEPKH 100
            |..||||....:||||.:...:|..|:.||::|..|||...:...|||:|.|:||||||||.|:|
  Rat    45 RHSGDHGKRLFVIKPSLYYDARFLRLMKFYLLLTGIPVIIGITLVNIFIGEAELAEIPEGYIPEH 109

  Fly   101 WEYEKHPISRFISRYILNSDQQNYEKSLHYLYEENEKAQIRLLEDEVRRKMSERNDYQAYYY 162
            |||.||||||:|:|...:..::||||:|..|..|:|||.:||.|.||||.|..|.|...|.|
  Rat   110 WEYYKHPISRWIARTFYDGPEKNYEKTLAILQIESEKADLRLKELEVRRLMRARGDGPWYQY 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-SGDHNP_001261742.1 NDUF_B5 1..179 CDD:286821 65/127 (51%)
Ndufb5NP_001099896.1 NDUF_B5 1..188 CDD:286821 65/127 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352687
Domainoid 1 1.000 128 1.000 Domainoid score I5222
eggNOG 1 0.900 - - E1_KOG4632
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H31093
Inparanoid 1 1.050 128 1.000 Inparanoid score I4582
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1251699at2759
OrthoFinder 1 1.000 - - FOG0006923
OrthoInspector 1 1.000 - - oto96413
orthoMCL 1 0.900 - - OOG6_108543
Panther 1 1.100 - - LDO PTHR13178
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5831
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.760

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