DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pglym87 and GPM1

DIOPT Version :9

Sequence 1:NP_652041.2 Gene:Pglym87 / 46246 FlyBaseID:FBgn0011270 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_012770.1 Gene:GPM1 / 853705 SGDID:S000001635 Length:247 Species:Saccharomyces cerevisiae


Alignment Length:248 Identity:139/248 - (56%)
Similarity:172/248 - (69%) Gaps:4/248 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RIVMVRHGESEWNQKNLFCGWFDAKLSEKGQQEACAAGKALKDAKIEFDVAHTSVLTRAQETLRA 107
            ::|:||||:||||:||||.||.|.|||.||||||..||:.||:.|:..||.:||.|:||.:|...
Yeast     3 KLVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKKVYPDVLYTSKLSRAIQTANI 67

  Fly   108 ALKSSEHKKIPVCTTWRLNERHYGGLTGLNKAETAKKFGEEKVKIWRRSFDTPPPPMEKDHEYYA 172
            ||:.::...|||..:|||||||||.|.|.:||||.|||||||...:|||||.||||::....:..
Yeast    68 ALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKFGEEKFNTYRRSFDVPPPPIDASSPFSQ 132

  Fly   173 CIVEDPRYKDQLKPEEFPKSESLKLTIERTLPYWNEVIVPQIKDGMRVLIAAHGNSLRGVVKHLE 237
              ..|.||| .:.|...|::|||.|.|:|.||||.:||...:..|..|:||||||||||:|||||
Yeast   133 --KGDERYK-YVDPNVLPETESLALVIDRLLPYWQDVIAKDLLSGKTVMIAAHGNSLRGLVKHLE 194

  Fly   238 CISDKDIMSLNLPTGIPFVYELDESLKPLATLKFLGDPETVKKAMESVANQGK 290
            .|||.||..||:|||||.|:||||:|||.....:| |||.......:||||||
Yeast   195 GISDADIAKLNIPTGIPLVFELDENLKPSKPSYYL-DPEAAAAGAAAVANQGK 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pglym87NP_652041.2 gpmA 42..292 CDD:184516 139/248 (56%)
GPM1NP_012770.1 pgm_1 2..246 CDD:213596 137/246 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346331
Domainoid 1 1.000 156 1.000 Domainoid score I883
eggNOG 1 0.900 - - E1_COG0588
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56228
Inparanoid 1 1.050 270 1.000 Inparanoid score I602
Isobase 1 0.950 - 0 Normalized mean entropy S620
OMA 1 1.010 - - QHG61896
OrthoFinder 1 1.000 - - FOG0000615
OrthoInspector 1 1.000 - - otm46838
orthoMCL 1 0.900 - - OOG6_101500
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R933
SonicParanoid 1 1.000 - - X392
TreeFam 1 0.960 - -
1514.640

Return to query results.
Submit another query.