DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pglym87 and Pglym78

DIOPT Version :9

Sequence 1:NP_652041.2 Gene:Pglym87 / 46246 FlyBaseID:FBgn0011270 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_001034075.1 Gene:Pglym78 / 43447 FlyBaseID:FBgn0014869 Length:255 Species:Drosophila melanogaster


Alignment Length:253 Identity:192/253 - (75%)
Similarity:224/253 - (88%) Gaps:0/253 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 GKYRIVMVRHGESEWNQKNLFCGWFDAKLSEKGQQEACAAGKALKDAKIEFDVAHTSVLTRAQET 104
            |||:|||||||||||||||.||||:||.||||||:||.|||||:|||.:||||||||||||||.|
  Fly     3 GKYKIVMVRHGESEWNQKNQFCGWYDANLSEKGQEEALAAGKAVKDAGLEFDVAHTSVLTRAQVT 67

  Fly   105 LRAALKSSEHKKIPVCTTWRLNERHYGGLTGLNKAETAKKFGEEKVKIWRRSFDTPPPPMEKDHE 169
            |.:.||:|.||:||:..|||||||||||||||||||||.|:||.:|:||||||||||||||..|.
  Fly    68 LASILKASGHKEIPIQKTWRLNERHYGGLTGLNKAETAAKYGEAQVQIWRRSFDTPPPPMEPGHP 132

  Fly   170 YYACIVEDPRYKDQLKPEEFPKSESLKLTIERTLPYWNEVIVPQIKDGMRVLIAAHGNSLRGVVK 234
            ||..||:||||.:..||||||:.|||||||||||||||:||:||:|:|.|:|||||||||||:||
  Fly   133 YYENIVKDPRYAEGPKPEEFPQFESLKLTIERTLPYWNDVIIPQMKEGKRILIAAHGNSLRGIVK 197

  Fly   235 HLECISDKDIMSLNLPTGIPFVYELDESLKPLATLKFLGDPETVKKAMESVANQGKAK 292
            ||:.:|:..||:|||||||||||||||:.||:.:::||||.||||||:|:||.|||||
  Fly   198 HLDNLSEDAIMALNLPTGIPFVYELDENFKPVVSMQFLGDEETVKKAIEAVAAQGKAK 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pglym87NP_652041.2 gpmA 42..292 CDD:184516 188/249 (76%)
Pglym78NP_001034075.1 HP 5..255 CDD:299704 188/249 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469452
Domainoid 1 1.000 183 1.000 Domainoid score I3361
eggNOG 1 0.900 - - E1_COG0588
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I1611
Isobase 1 0.950 - 0 Normalized mean entropy S620
OMA 1 1.010 - - QHG61896
OrthoDB 1 1.010 - - D496634at33208
OrthoFinder 1 1.000 - - FOG0000615
OrthoInspector 1 1.000 - - mtm6585
orthoMCL 1 0.900 - - OOG6_101500
Panther 1 1.100 - - P PTHR11931
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R933
SonicParanoid 1 1.000 - - X392
1413.790

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