DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pglym87 and gpm1

DIOPT Version :9

Sequence 1:NP_652041.2 Gene:Pglym87 / 46246 FlyBaseID:FBgn0011270 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_594889.1 Gene:gpm1 / 2542085 PomBaseID:SPAC26F1.06 Length:211 Species:Schizosaccharomyces pombe


Alignment Length:221 Identity:97/221 - (43%)
Similarity:125/221 - (56%) Gaps:28/221 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 IVMVRHGESEWNQKNLFCGWFDAKLSEKGQQEACAAGKALKDAKIEFDVAHTSVLTRAQETLRAA 108
            :|:.||||||||:.|||.||.|..|||.|.:||...|:.||....:||:|.||.|.|||:|.:..
pombe    10 LVLTRHGESEWNKLNLFTGWKDPALSETGIKEAKLGGERLKSRGYKFDIAFTSALQRAQKTCQII 74

  Fly   109 LKSSEHKKIPVCTTWRLNERHYGGLTGLNKAETAKKFGEEKVKIWRRSFDTPPPPMEKDHEYYAC 173
            |:......:....:.:||||:||.|.||||.:..||:|.|:|:|||||:|..|            
pombe    75 LEEVGEPNLETIKSEKLNERYYGDLQGLNKDDARKKWGAEQVQIWRRSYDIAP------------ 127

  Fly   174 IVEDPRYKDQLKPEEFPKSESLKLTIERTLPYWNEVIVPQIKDGMRVLIAAHGNSLRGVVKHLEC 238
                            |..||||.|.||.|||:...|||.|..|.:|||||||||||.::..||.
pombe   128 ----------------PNGESLKDTAERVLPYYKSTIVPHILKGEKVLIAAHGNSLRALIMDLEG 176

  Fly   239 ISDKDIMSLNLPTGIPFVYELDESLK 264
            ::...|:...|.||:|.||.||:..|
pombe   177 LTGDQIVKRELATGVPIVYHLDKDGK 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pglym87NP_652041.2 gpmA 42..292 CDD:184516 97/221 (44%)
gpm1NP_594889.1 HP 7..210 CDD:299704 97/221 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 164 1.000 Domainoid score I949
eggNOG 1 0.900 - - E1_COG0588
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1111
OMA 1 1.010 - - QHG61896
OrthoFinder 1 1.000 - - FOG0000615
OrthoInspector 1 1.000 - - otm47266
orthoMCL 1 0.900 - - OOG6_101500
Panther 1 1.100 - - O PTHR11931
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R933
SonicParanoid 1 1.000 - - X392
TreeFam 1 0.960 - -
1312.860

Return to query results.
Submit another query.