DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment poe and ubr5

DIOPT Version :9

Sequence 1:NP_001260222.1 Gene:poe / 46243 FlyBaseID:FBgn0011230 Length:5322 Species:Drosophila melanogaster
Sequence 2:XP_021322301.1 Gene:ubr5 / 334627 ZFINID:ZDB-GENE-030131-6559 Length:2833 Species:Danio rerio


Alignment Length:1749 Identity:343/1749 - (19%)
Similarity:568/1749 - (32%) Gaps:628/1749 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   678 GSGNAPAASAGAGTSAGAS----------TKWQTSMIRF-----SGAAGRYIHNLISTSLLSEQL 727
            |.|:.....||.||..|.|          ::.||.:||.     ||..|.....:|..|::.|:|
Zfish   152 GGGSGSGGGAGGGTGGGGSSGRSSTAARDSRRQTRVIRTGRDRGSGLLGSQPQPVIPASVIPEEL 216

  Fly   728 QSN---LLQHLSISPWSTDTNTWPLQVYPSTLSVLVQILLLKPTQEKEAACLSVWHRLINTLV-- 787
            .|.   :||..|                   .||::        :|.:...|.| :..:|.|:  
Zfish   217 ISQAQVVLQGKS-------------------RSVII--------RELQRTNLDV-NLAVNNLLSR 253

  Fly   788 ---EGVCSSNTASDSDY-----------EDLNIEHAQLLL-----------------FLFHSLNL 821
               :|....:|||:| |           .|::..|..:::                 |...||:.
Zfish   254 DDEDGDDGDDTASES-YLPGEDLMSLLDADIHSAHPSVIIDADAMFSEDISYFGYPSFRRSSLSR 317

  Fly   822 MQKKSILLL----------TAGGVIRCAE----------VCRGIS--EDRPVKNSQIMLLSRLLL 864
            :....:|||          ....|:|..|          ..||.:  |..|..:.:.:.|     
Zfish   318 LGSSRVLLLPLERDSELLRERESVLRLRERRWLDGASFDAERGSTSREGEPSLDKKSVPL----- 377

  Fly   865 FLEYLMKHLYNAPPELLDQVRWNLFSVSSMPDTQKITDLLNCRTKLNSYCRHDIEENFRKSAGEY 929
                      .:|..|.::::|       .||...:|..:                    |.|..
Zfish   378 ----------QSPVTLGEELQW-------WPDKDYVTKFV--------------------SIGAL 405

  Fly   930 GS-----SIRPTFYSLVMGDPEISYWAQEFKLDGLAWNFILCTPDKLKYPLLVDALTDILSITDM 989
            .|     |.:...|.....:||....||...:......|:..|.:|         :|.:.:.:..
Zfish   406 YSELVAVSTKGELYQWKWNEPEPYRNAQNPSIHHPRVPFLGLTNEK---------ITHLSANSIR 461

  Fly   990 SMYSKEKDKEASMHNLCAIQYCFTIAWKLNLGLPPSTSHVESLKAERSPNLH------------S 1042
            :..:.|.:|.|:..:    :...|:|.||..|    ......|:.||..:||            |
Zfish   462 ATVATENNKVATWVD----ETLSTVAAKLEHG----AQTFPELQGERIVSLHCCALYTCAQLENS 518

  Fly  1043 LMWSIRLPLASSHYLVVSSLIKQGMYTQYAETLWTHVGDIGADIKYSLKQTIL---GVEAFNSQM 1104
            |.|...:|.:....::..:..|.......|..  :.:.:|....:..|:...|   |..||:  :
Zfish   519 LYWWGVVPFSQRKKMLEKARAKNKKPKSSAGI--SSIPNITVGTQVCLRNNPLYHAGAVAFS--V 579

  Fly  1105 NGNGTPRLSDLILFDSLVAHMQAVAWANKEGLKWPRKESEDAAG-EQSAGTSLTSSSNDPEL--- 1165
            |. |.|::.  :|.:|:        |...:..::..:..|.... |::..|..|.:.:.|||   
Zfish   580 NA-GIPKVG--VLLESV--------WNMNDSCRFQLRSPESLKNMEKNTKTQETKTESKPELVKT 633

  Fly  1166 -----------------YSSNESIDDQKLKQDDDGKLSSDLQKYNQLVNELMVKLMNSYQLLSVI 1213
                             .:|:.|:..::       :.|:...|..:.|||      ..:.|..|:
Zfish   634 EMGPPPSPASTCSDTSSIASSASLPYKR-------RRSTPAPKEEEKVNE------EQWPLREVV 685

  Fly  1214 ----VR----GQMLK-----------QLSSSTPEKALNLIVPIVSDKPAIMLELHAAFLKLLPNE 1259
                |:    |::||           ..|||...::   ..|..||..:::.:     .:||..:
Zfish   686 FVEDVKNVPVGKVLKVDGAYVAVKFPGTSSSVSSQS---AAPTDSDPSSLLQD-----CRLLRID 742

  Fly  1260 DKQLIA-----------NEWPKCLMVNDFAFNGKQHPVEPYILNV-IDA---HIIELTRGSNYST 1309
            :.|::.           ...||.|.:          |.:..||.| :|:   |.: |..||    
Zfish   743 ELQVVKTGGTPKVPDCFQRTPKKLCI----------PEKAEILAVNVDSKGVHAV-LKTGS---- 792

  Fly  1310 LHTLKHCLKSILQLFELLLPHRTANAEVETQLKQLLISSMLDMRTDYLQGHSEHCLREILSGLTQ 1374
              .:::|      :|:|    .|..||.|.......::.:         |.||..:....:|  |
Zfish   793 --WVRYC------VFDL----ATGKAEQENHFPTSNLAFL---------GQSERNVAIFTAG--Q 834

  Fly  1375 EAQKLLLYEHMVGYCYRMLKEFAADLRQPQ----------SAGPSGGAPLDQDRAMFNESMLFAV 1429
            |:..:|...:  |..|.|.|:....:|.|.          ..|....|.|..:..:..::.:   
Zfish   835 ESPIILRDGN--GTIYPMAKDCMGGIRDPDWLDLPPIASLGMGVHSLANLPSNSTIKKKAAI--- 894

  Fly  1430 LKTMFKMLEKPVAVQ--------AMRQF--------FKDQRSGSLTTLLLSFTGTSLPVSYARKM 1478
               :...:||...:|        |.||:        ..:|...:|.|||......:..|.:|   
Zfish   895 ---IIMAVEKQTLMQHVLRCDYEACRQYLISLEQAMLLEQNPHALDTLLGHRCDGNRNVLHA--- 953

  Fly  1479 LQFVNRLFQLSLQADSQFQHEDLVE--CFSE-LATVD-VARLKQWLGHIIYGPNVS---TDVSTS 1536
              .|:..|.:|.:...:.:..:..|  .|:| |:.|: :|....     :...|.|   |..|:|
Zfish   954 --CVSVCFPVSNKETKEEEEAERSERNTFAERLSAVEAIANAIS-----VVSSNSSGNRTGSSSS 1011

  Fly  1537 EALDTTCRMLTSI------LQPSSSSSSNAQTPTNMATVSAMPSISDQLDPMEIEYDCG---TAA 1592
            ..|.....|..|:      ...|..|||:.|.|  ::...|.||......||:.:.|..   ..|
Zfish  1012 RGLRLREMMRRSLRAAGLGRHESGPSSSDHQDP--VSPPIAPPSWVPDPPPMDPDGDIDFILAPA 1074

  Fly  1593 GGGESNPGTG-GAAANTSQILSLWQAAQPNPSEESSQACDHSDSERNGALLLSFVKSLVKDQSKA 1656
            .|..:...|| ....:||.|        |.||.|.| ..:..|.:.|..|:|..:          
Zfish  1075 VGSLTTASTGTSQGPSTSTI--------PGPSSEPS-VVESKDRKANAHLILKLM---------- 1120

  Fly  1657 SQIAPPLFQALLQLGQTLISPPQEGCDFADVLQIMITLADASPARGHVAL--------FNTTLLW 1713
                                     ||...:...:..|..|..|||....        :...:..
Zfish  1121 -------------------------CDSIVLRPHLRELLSAKDARGMTPFMLAVSGRAYPAAITV 1160

  Fly  1714 LELA-KLQLPDKHLKHAENVSAQLRYLSELLQSIGFRGSRQHNPPWDDELQTDIDELYDELAEEG 1777
            ||.| |:...:..|...|:.:      |..::.|...|:   ||                     
Zfish  1161 LEAAQKIAKGEPGLGEKEDTA------SVFMEMICPSGT---NP--------------------- 1195

  Fly  1778 EQDSLLDDSDEDTL-NNKLCTFSQTQKEFMNQHWYHCHTCNMINTVGVCSVCARVCHKGHDVSYA 1841
                  |||....| .|..|:|:.|..|.:||..:.|.||.::.::..|:.||||||||||....
Zfish  1196 ------DDSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGHDCKLK 1254

  Fly  1842 KYG-NFFCDCGAKEDGSCQALSRRIGSNEVRDSAGIGSYLPSHMSLLAGKKRSSLPVGQPVLTRK 1905
            :.. ..:|||..|    |:.                       .:|:||:|.:.|.:...:||..
Zfish  1255 RTSPTAYCDCWEK----CKC-----------------------KTLIAGQKAARLDLLYRLLTTT 1292

  Fly  1906 DSLT--NER-IAVLTKLLEPYRETLQHQDQWLLVVRCILEYFDLLLPSINENCMLYSIVGCHKRA 1967
            :.:|  |.| ..:|..|::             .|.|..:|:.....|.|.|:       ...|.|
Zfish  1293 NLVTTPNSRGEHILLFLVQ-------------TVARQSVEHCQYRPPRIRED-------RNRKAA 1337

  Fly  1968 TA------------------ALERLHLLEQSFQVTDQLMFATLGSQEGAFENVRMNYSGD---QG 2011
            :|                  ||||  :|:....:...:||   ||||          :.|   ..
Zfish  1338 SAEDSDMPDHDLEPPRFAQLALER--VLQDWNALKSMIMF---GSQE----------NKDPLSAS 1387

  Fly  2012 QTIKHLL---------SSGVVRRVAFC-CL---SSPH---------------------GRRQQLA 2042
            ..|.|||         .||.:|...|. ||   .:|.                     |||::..
Zfish  1388 SRIAHLLPEEQMYLNQQSGTIRLDCFTHCLIVKCAPDITFIDTLLGTLVKELQNKYTPGRREEAI 1452

  Fly  2043 VSHEKGKVTILQLSALLKQADASKRKLTLTQLSSAPIA-CTVISLAANP------CN--EDCL-- 2096
            ....:...::.::..:|....||.:|  .......||. |..:..|..|      ||  |..:  
Zfish  1453 NVTRRFLRSVARVFVILSVEMASSKK--KNNFIPQPIGKCRRVFQALLPYAVEELCNVAESLIVP 1515

  Fly  2097 --------------------AVCGLKECHIL-----------TFSSSGSTNEHIVVNPQ 2124
                                ||.|.:|...:           :.|||.|.:.:|:.|||
Zfish  1516 VRMGIARPTAPFTLASTSIDAVQGSEELFSVEPLPPRPSPDQSSSSSQSASSYIIRNPQ 1574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
poeNP_001260222.1 ZnF_UBR1 1794..1862 CDD:197698 25/68 (37%)
DZR 3793..3837 CDD:289539
E3_UbLigase_R4 4493..5296 CDD:290481
ubr5XP_021322301.1 E3_UbLigase_EDD 206..253 CDD:288409 15/74 (20%)
ZnF_UBR1 1207..1274 CDD:197698 25/93 (27%)
PolyA 2423..2486 CDD:197769
HECTc 2505..2830 CDD:214523
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D717at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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