DRSC/TRiP Functional Genomics Resources

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Protein Alignment MYH6 and ninaC

DIOPT Version :10

Sequence 1:NP_002462.2 Gene:MYH6 / 4624 HGNCID:7576 Length:1939 Species:Homo sapiens
Sequence 2:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster


Alignment Length:1081 Identity:266/1081 - (24%)
Similarity:453/1081 - (41%) Gaps:214/1081 - (19%)


- Green bases have known domain annotations that are detailed below.


Human     5 QMADFGAAAQYLRKSEKER---LEAQTRPFDIRTECFVPDD--KEEFVKAKILSREGGKVIAETE 64
            |:.||  .::.|.|:.:.|   :|....||  .||....:|  :.:..:...|||:...:..|.|
  Fly   254 QINDF--ISESLEKNAENRPMMVEMVEHPF--LTELIENEDEMRSDIAEMLELSRDVKTLYKEPE 314

Human    65 NGKTVTVKEDQV--LQQNPPKFDKIEDMAMLTFLHEPAVLFNLKERYAAWMIYTYSGLFCVTVNP 127
                :.|....|  ..:.|.|... ||:|.|....:..::.:|:.|......|::.|...:::|.
  Fly   315 ----LFVDRGYVKRFDEKPEKMYP-EDLAALENPVDENIIESLRHRILMGESYSFIGDILLSLNS 374

Human   128 YKWLPVYNAEVVAAYRGKKRSEAPPHIFSISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVI 192
            .:....:..|..|.||.|.|||..|||||::|.|||.||..:|.|.|:::|||.:||:.|.:.:|
  Fly   375 NEIKQEFPQEFHAKYRFKSRSENQPHIFSVADIAYQDMLHHKEPQHIVLSGESYSGKSTNARLLI 439

Human   193 QYFASIAAIGDRGKKDNANANKGTLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGATG 257
            ::...:.. |:||.       .|.:|..|    .|:....||.|..|::|:|......:.||.||
  Fly   440 KHLCYLGD-GNRGA-------TGRVESSI----KAILMLVNAGTPVNNDSTRCVLQYCLTFGKTG 492

Human   258 KLASADIETYLLEKSRVIFQLKAERNYHIFYQILS--NKKPELLDMLLVTNNPYDYAFVSQGEVS 320
            |::.|....|:|||.||......:.|:||||....  |::.:|.:..|..:..|.|..|.. ||.
  Fly   493 KMSGAVFNMYMLEKLRVATTDGTQHNFHIFYYFYDFINQQNQLKEYNLKADRNYRYLRVPP-EVP 556

Human   321 VASI----DDSEELMATDSAFD----VLGFTSEEKAGVYKLTGAIMHYGNMKFKQKQREEQAEPD 377
            .:.:    ||.|..:.....|:    .:.|..::...|.|:..||::.||::|:|..:  .||.:
  Fly   557 PSKLKYRRDDPEGNVERYREFENILRDIDFNHKQLETVRKVLAAILNIGNIRFRQNGK--YAEVE 619

Human   378 GTEDADKSAYLMGLNSADLLKGLCHPRVKVGNEYVTKGQSVQQVYYSI-------GALAKAVYEK 435
            .|:...:.|.|:.::....:..|.       |..:.||...::..|:.       .|:|..:|.:
  Fly   620 NTDIVSRIAELLRVDEKKFMWSLT-------NFIMVKGGIAERRQYTTEEARDARDAVASTLYSR 677

Human   436 MFNWMVTRINATLETKQPRQYF-----IGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMF 495
            :.::::.|||..:..  ||..|     |.:.|:.|||.|:.|..|||.||..||::|..:|..:|
  Fly   678 LVDFIINRINMNMSF--PRAVFGDTNAIIIHDMFGFECFNRNGLEQLMINTLNEQMQYHYNQRIF 740

Human   496 VLEQEEYKKEGIEWTFIDFGMDLQACIDLIEKPMGIMSILEEECMFPKATDMTFKAKLYDNHLGK 560
            :.|..|.:.|.|:...::|..:..|..:|:.||.|:..|:::.....:..|:     :.|....|
  Fly   741 ISEMLEMEAEDIDTINLNFYDNKTALDNLLTKPDGLFYIIDDASRSCQDQDL-----IMDRVSEK 800

Human   561 SNNFQKPRNIKGKQEAHFSLIHYAGTVDYNILGWLEKNKDPLNETVVALYQKSSLKLMATLFSSY 625
            .:.|     :|.......|:.||.|.:.|:...:.:.|:|.:...::..::.|..:.:..:|::.
  Fly   801 HSQF-----VKKHTATEISVAHYTGRIIYDTRAFTDINRDFVPPEMIETFRSSLDESIMLMFTNQ 860

Human   626 ATADTGDSGKSKGG---------------KKKGSSFQTVSA---LHRENLNKLMTNLRTT----- 667
            .|         |.|               ::|..:..|:||   ....||..|..|.|.|     
  Fly   861 LT---------KAGNLTMPFEAVQHKDESERKSYALNTLSAGCISQVNNLRTLAANFRFTCLTLL 916

Human   668 ---------HPHFVRCIIPNERKAPGVMDNPLVMHQLRCNGVLEGIRICRKGFPNRILYGDFRQR 723
                     ..||||||..:....|....:.:|..|::..|||:.:...:|||.:|:.:.:|.:|
  Fly   917 KMLSQNANLGVHFVRCIRADLEYKPRSFHSDVVQQQMKALGVLDTVIARQKGFSSRLPFDEFLRR 981

Human   724 YRILNPVAIPEGQFIDSRKGTEKLLSSLDIDHNQYKFGHTKVFFKAGLLGLLEEMRDERLSRI-- 786
            |:.|   |....:.::..|...:|| .|.:....:..|.||||        |....||.|:|:  
  Fly   982 YQFL---AFDFDEPVEMTKDNCRLL-FLRLKMEGWALGKTKVF--------LRYYNDEFLARLYE 1034

Human   787 -----ITRMQAQARGQLMRIEF---------KKIVERRD-ALLVIQWNIRAFMGVKNWPWMKLYF 836
                 :.::|:..|..|.|...         ||..|..| |...||   :||.|.::      ..
  Fly  1035 LQVKKVIKVQSMMRALLARKRVKGGKVFKLGKKGPEHHDVAASKIQ---KAFRGFRD------RV 1090

Human   837 KIKPLL--KSAETEKEMATMKEEFGRIKETLEKS---------EARRKEL----------EEKMV 880
            ::.||:  ||.:..:..|.....|.  |:..|||         .||.::.          .::||
  Fly  1091 RLPPLVNEKSGQLNENTADFIRPFA--KKWREKSIFQVLLHYRAARFQDFVNLSQQVHIYNQRMV 1153

Human   881 SLLQEKNDLQLQVQAEQDNLNDAEE---------------RCDQL----------IKNKIQLEAK 920
            :.|   |.....|..|:.|:.:...               |.||:          ..|.|..:|.
  Fly  1154 AGL---NKCTRAVPFERINMREVNSSQLGPLPVPIKKMPFRLDQIPFYDTQYMVDPANSISRQAF 1215

Human   921 VKE-MNERLEDEEEMNA-----------ELTAKKRKLEDEC 949
            ..: :.:.:||:|..::           .||....|.|..|
  Fly  1216 PNQLLTQHMEDDEPWDSPLQRNPSMTSCALTYNAYKKEQAC 1256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYH6NP_002462.2 Myosin_N 32..76 CDD:460670 9/45 (20%)
MYSc_class_II 99..768 CDD:276951 189/722 (26%)
Actin-binding 657..679 11/35 (31%)
Actin-binding 759..773 5/13 (38%)
Myosin_tail_1 848..1925 CDD:460256 29/158 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1826..1849
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1909..1939
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785 9/31 (29%)
MYSc_Myo21 346..1022 CDD:276848 189/730 (26%)
Blue background indicates that the domain is not in the aligned region.

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