DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn and samd14

DIOPT Version :10

Sequence 1:NP_001246578.1 Gene:Spn / 46194 FlyBaseID:FBgn0010905 Length:2148 Species:Drosophila melanogaster
Sequence 2:XP_003199616.1 Gene:samd14 / 100537418 ZFINID:ZDB-GENE-160513-1 Length:368 Species:Danio rerio


Alignment Length:380 Identity:87/380 - (22%)
Similarity:130/380 - (34%) Gaps:106/380 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1631 ELDAAVPQHELLDNSINKTKIDLASRGGLANRQLPS----ANGNSSTSNGAAVDLGQLSNG---- 1687
            :|..|||:.|.||:|:.|.|..|:.:   ..|..||    .:..||......:|  ::|.|    
Zfish    15 DLTEAVPETERLDSSLQKAKAQLSIK---TRRHRPSRTRLRDSVSSIDGDDGID--RMSYGSSPV 74

  Fly  1688 -----------NLLKRSRSNSRSSDCTLDDTDEEEEREGSALNLAGAPVAHETISLSNGNSHLLA 1741
                       :||..|.|:.|....|.|......|||          |..|..|.    .|||.
Zfish    75 HPSFHCSSPSSDLLLSSPSSRRDRAFTFDPCTVVGERE----------VQDEKRSY----RHLLN 125

  Fly  1742 NVNNLLQHHP---PAMATVIA-TPSNGHLGTT---------TPILLNSTSSASSSSS-------- 1785
            .....|...|   |:.|.|.: |.|..||..|         .|:|.....|.|...|        
Zfish   126 TSQETLPLSPLKSPSRACVHSETSSPAHLCQTDRLKSREGSQPLLHYGEYSQSEDESHDTGPDDP 190

  Fly  1786 -------NQSTARE-----AQINQLYAQVHKDPSKQ-----QHQQQQQQQQQAQAVTTSIP-SIF 1832
                   ::.|.|.     ..:.:.|.:|.||.|.:     :..::.:.:....:....:| |.|
Zfish   191 DSPTVLLDKKTRRRFLDLGVTLRRTYGKVRKDRSNRLSAGNRDSERTENRSSRSSGPPFVPFSWF 255

  Fly  1833 KNAL---GSPADN--GLNDFHRGSMTTFGTGPATSSNRDLNSSYDSILGSNDKLAENDPAESWMY 1892
            ...|   |||.:|  ....|.:||.|              :..:||.:|..:.........|..|
Zfish   256 SERLRGSGSPKNNQSPSKPFTQGSST--------------DEDFDSSVGLLEDCRPCKTESSQPY 306

  Fly  1893 PSRRRVAPNGSKVPLPGSSFTDQ---LNQALSDR-ERRLG------DGSSRHSSD 1937
            .:....:.......:.|:.|:.:   |:.|..|| ||:.|      .|.:.||.|
Zfish   307 QTLPEHSDGNDCDSIRGTDFSFKKKVLSAAGKDRTERQNGVHGKRDSGKNGHSED 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SpnNP_001246578.1 PDZ_5 1182..1254 CDD:465518
PDZ_neurabin-like 1258..1347 CDD:467252
SMC_N <1344..1606 CDD:481474
CENP-F_leu_zip 1424..1535 CDD:463102
SAM_Neurabin-like 2050..2118 CDD:188911
samd14XP_003199616.1 None
Blue background indicates that the domain is not in the aligned region.

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