DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gug and mta1

DIOPT Version :9

Sequence 1:NP_001261581.1 Gene:Gug / 46156 FlyBaseID:FBgn0010825 Length:2007 Species:Drosophila melanogaster
Sequence 2:XP_031746259.1 Gene:mta1 / 496581 XenbaseID:XB-GENE-1007626 Length:704 Species:Xenopus tropicalis


Alignment Length:241 Identity:68/241 - (28%)
Similarity:99/241 - (41%) Gaps:20/241 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QGEIRVGPGHQVNDVYAKLPDYNPISSFPIDKETDERELEESRW-SPGVVADGDLLMFLRAARSM 69
            :||||||..:|.        |...:.....:...|:..||...| :...:.|..:..||..|||:
 Frog   147 KGEIRVGNRYQA--------DITDLLEEGAEDGRDQANLETKVWEASNPLTDKQIDQFLVVARSV 203

  Fly    70 AAFQGMCD-------GGLEDGCLAASRDDTTINALDVLHDSGYDPGKALQALVK--CPV-SKGID 124
            ..|....|       ..|.....|||||.|..:|:|.||.:.||..||:.|||.  .|| .:...
 Frog   204 GTFARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNTYDISKAISALVPQGGPVLCRDEM 268

  Fly   125 KKWTEDETKKFIKGLRQFGKNFFRIHKDLLPHKDTPELVEFYYLWKKTPG-ANNNRPHRRRRQSA 188
            ::|:..|...|.:.|.::||:|..|.:|.||.|....::|:||:||.|.. ....|......:|.
 Frog   269 EEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRYVQQKRLKAAEAESK 333

  Fly   189 LRRNRVTRANNSNSNTPPKKEDTPEPQTATTATAAATAASETASRS 234
            |::..:...|..|.|........|.....|.......|......|:
 Frog   334 LKQVYIPNYNKPNPNQINVNNVKPAVVNGTAVQGQNVAVGRACERA 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GugNP_001261581.1 ELM2 9..68 CDD:279754 14/59 (24%)
SANT 125..172 CDD:197842 17/46 (37%)
SANT_MTA3_like 126..171 CDD:212559 16/44 (36%)
Sec_Non_Glob 344..>440 CDD:275213
mta1XP_031746259.1 BAH_MTA 3..171 CDD:240060 8/31 (26%)
ELM2 150..202 CDD:396160 14/59 (24%)
SANT_MTA3_like 270..315 CDD:212559 16/44 (36%)
ZnF_GATA 377..428 CDD:214648 1/3 (33%)
MTA_R1 451..527 CDD:407344
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D802091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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