DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gug and RERE

DIOPT Version :9

Sequence 1:NP_001261581.1 Gene:Gug / 46156 FlyBaseID:FBgn0010825 Length:2007 Species:Drosophila melanogaster
Sequence 2:NP_001036146.1 Gene:RERE / 473 HGNCID:9965 Length:1566 Species:Homo sapiens


Alignment Length:2175 Identity:514/2175 - (23%)
Similarity:667/2175 - (30%) Gaps:1096/2175 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 STQGEIRVGPGHQVNDVYAKLPDYNPISSFPIDKETDERELEESRWSPGVVADGDLLMFLRAARS 68
            ||||||||||.||     |||||..|..|...|..|...||.   |.|| |.|.||||:||||||
Human   281 STQGEIRVGPSHQ-----AKLPDLQPFPSPDGDTVTQHEELV---WMPG-VNDCDLLMYLRAARS 336

  Fly    69 MAAFQGMCDGG-LEDGCLAASRDDTTINALDVLHDSGYDPGKALQALVKCPVSKGIDKKWTEDET 132
            ||||.|||||| .||||:||||||||:|||:.||:||||.|||||.|||.||.|.|:|.|||||.
Human   337 MAAFAGMCDGGSTEDGCVAASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIEKCWTEDEV 401

  Fly   133 KKFIKGLRQFGKNFFRIHKDLLPHKDTPELVEFYYLWKKTPGANNNRPHRRRRQSALRRNRVTRA 197
            |:|:|||||:|||||||.|:|||:|:|.||:.|||.|||||.|.::|.|||.|:.|:.|...||.
Human   402 KRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKTPEAASSRAHRRHRRQAVFRRIKTRT 466

  Fly   198 NNSNSNTPPKKEDTPEPQTATTATAAATAASETASRSSPAVSKEENSSLTEDDASECDSDSSLTH 262
            .::..|||.:                           .|:....:.||.:|||....||:..|. 
Human   467 ASTPVNTPSR---------------------------PPSSEFLDLSSASEDDFDSEDSEQELK- 503

  Fly   263 KRDESPSRMRTRNKQQNNNSSTSSGNNTAGNGGGNATSISSGSTGGGAAGGNSSSKDQSANAVAN 327
                                             |.|......:|          |||..     :
Human   504 ---------------------------------GYACRHCFTTT----------SKDWH-----H 520

  Fly   328 GKRP------------KRGSETPDVSGGASVDSPKTPTKAVAESSANKRKGGKQDTPNKKKRTEQ 380
            |.|.            |:..|.|.:.  ..||.|....|.|.|.  :....||.....::.|...
Human   521 GGRENILLCTDCRIHFKKYGELPPIE--KPVDPPPFMFKPVKEE--DDGLSGKHSMRTRRSRGSM 581

  Fly   381 ESNEPSAHEENAIKEKRKRPDSPVESMNSDSRPDSVLDDGESNTTDTTTAEQQSTKDSK-ETV-- 442
            .:....         ::|:|.||      |.|...:.:|..|:..::.:|...|:.||| |||  
Human   582 STLRSG---------RKKQPASP------DGRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKK 631

  Fly   443 SCKEEREMVTNDLEAKAEEKAIKAEALAEDSKDSAIKNMDEETNIQAPSSADTSLVDGPNPNALP 507
            |.|:.:|..::.|::...::    |.:|.|::::                               
Human   632 SAKKVKEEASSPLKSNKRQR----EKVASDTEEA------------------------------- 661

  Fly   508 SPVAAPITMKVPTIATVEALNASVDRKEAIEKMESCDSDPEMLKKLATIKQEVSPQQQQHMQQQS 572
                                    ||..:              ||..|  ||:|.          
Human   662 ------------------------DRTSS--------------KKTKT--QEISR---------- 676

  Fly   573 QQQMQQQLAPVGIPQPPSCPPSESVYIKKEPMEDSMDATCNQNSNEPQDLKVKIEIKNEDALKHS 637
                         |..||....||        .||.... ::.|::|:|:               
Human   677 -------------PNSPSEGEGES--------SDSRSVN-DEGSSDPKDI--------------- 704

  Fly   638 AGGLPPSGPCAPPSALHPLSGAPVESGQEPLHLQHMPHGQVTTQPPPGYLIDGQLKYGPSGQGVP 702
                                                                             
Human   705 ----------------------------------------------------------------- 704

  Fly   703 PQPPQLHSDAAGGVSGAPPGAPTTPQKYPPEMEMKFAPQDLKYPPPPPLDALKYSQEMQAAAAAA 767
                                                                  .|:.::.:   
Human   705 ------------------------------------------------------DQDNRSTS--- 712

  Fly   768 AAAGKYDMKYMMEQQGKYNVELSAAHQPPSKPGYQDSLKIPDIKPGFGHLPHNVGSPLDAAHKYG 832
                                        ||.|..||:....|                       
Human   713 ----------------------------PSIPSPQDNESDSD----------------------- 726

  Fly   833 PPPTSQESQQQQPQPPAHQVPPGATPPPGIAMPKPHYQHDVQTPPLGRPFEPTGLMLKYGDPLAA 897
               :|.:.|..|.||||.|.|.|.||.|..|.|                                
Human   727 ---SSAQQQMLQAQPPALQAPTGVTPAPSSAPP-------------------------------- 756

  Fly   898 KYGPPQDLKYPMPPVSQAGPADVKPYGGENLIKSSPYGPPPESPIDASARSTPGQDSQGSNSNSQ 962
              |.||   .|.|                        ||.|      ||.:.|   .|||.:.||
Human   757 --GTPQ---LPTP------------------------GPTP------SATAVP---PQGSPTASQ 783

  Fly   963 PPSMPPQPQQFQSPHPSPHMPSPAGGGLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPTSLH---Q 1024
            .|:   |||...:|.|..|:..      .|.:|||.     ||      .|.|||.| |.|   |
Human   784 APN---QPQAPTAPVPHTHIQQ------APALHPQR-----PP------SPHPPPHP-SPHPPLQ 827

  Fly  1025 PTPTSAGPPSLQHGLHPGHQHSQLSVASSIPPSSIGIPPTLSTMAPSHMHPHLHPHAHLQGLHRP 1089
            |...|||.||                                  ||||..|.||.    ||...|
Human   828 PLTGSAGQPS----------------------------------APSHAQPPLHG----QGPPGP 854

  Fly  1090 HDL---PPSMHPHAPMPLSLQGHPQHGHGLPPSHTSQQQQQQQQQQQPGGPAGTVRTPSPAQQPP 1151
            |.|   |...||..|.|.          ||||        |..|.|.|.|.:.....|..:.|.|
Human   855 HSLQAGPLLQHPGPPQPF----------GLPP--------QASQGQAPLGTSPAAAYPHTSLQLP 901

  Fly  1152 RSMHDPQSSREPPTSQPSTTMAGSSGPGGPPPQQSPHAHRTSPLPGLAGSGPPPPGLIGHPMAIH 1216
            .|....| |::||..||..          |.|...||..            |||...|       
Human   902 ASQSALQ-SQQPPREQPLP----------PAPLAMPHIK------------PPPTTPI------- 936

  Fly  1217 PHLAHLPPGHPAHAALAHPGHHLLSHSIAGLGPGGGPIALLAGPGGLGGIPESALSRRTPPSHLP 1281
                   |..||..|..||.|                   |:||.     |.|..:...||.   
Human   937 -------PQLPAPQAHKHPPH-------------------LSGPS-----PFSMNANLPPPP--- 967

  Fly  1282 HSHASSAPLTAHSVASMTSTSMSLTTSTVPSSAFSRASPSVQISSSGGGPSGPGSVGPGGMPNSS 1346
                                                                             
Human   968 ----------------------------------------------------------------- 967

  Fly  1347 AAAAAAAAAHRAASPASSVSSLSRQSPLHPVPQSPLSHHPSSSALSAAAAAVAERDRHALMRQQS 1411
                       |..|.||:|                :|||                         
Human   968 -----------ALKPLSSLS----------------THHP------------------------- 980

  Fly  1412 PHMTPPPVSNASLM--ASPLSKMYAPQPGQRGLGTSPPPHLRPGASPPVIRHPQMPLPLPLIAPG 1474
            |...|||:   .||  :.||....|..||.......|||   |.:.||...|...|.|       
Human   981 PSAHPPPL---QLMPQSQPLPSSPAQPPGLTQSQNLPPP---PASHPPTGLHQVAPQP------- 1032

  Fly  1475 GGIPQIGVHPGQSPYPHPLLHPSVFYSPHHHPFNSPYGYAPYGPGFPAYMKPPPQPGQLDPAAVM 1539
                                               |:...|:.||                    
Human  1033 -----------------------------------PFAQHPFVPG-------------------- 1042

  Fly  1540 AAHHAGLQGPPPQQMRQDEQNAAAAAAQAAAEKQHQAAAAAAAQQHKAPQQQQPGGMPPNKPPTP 1604
                    ||||.                                           .||..|.|.
Human  1043 --------GPPPI-------------------------------------------TPPTCPSTS 1056

  Fly  1605 KTPQGPG-GGMPPGMGGPGTPTGLPPGAYPGSHMPGYPQGPPHGSPFAPQDGQPHGLKPTSHMDA 1668
            ..|.||| ...||..|.                                                
Human  1057 TPPAGPGTSAQPPCSGA------------------------------------------------ 1073

  Fly  1669 LRAHAHSANSAGMGGGHHPTEPLP-IDIEPD-----PEPEIPSPTHNIPRGPSPEAKPDDTECHR 1727
                  :|:...:.||  .:.||| :.|:.:     .|||.|.|.   ||.||||....||..|.
Human  1074 ------AASGGSIAGG--SSCPLPTVQIKEEALDDAEEPESPPPP---PRSPSPEPTVVDTPSHA 1127

  Fly  1728 SQSAIFVRHIDRGDYNSCTRTDLIFKPVADSKLARKREERDRKL---------AEKERERRQQQQ 1783
            ||||.|.:|:||| ||||.||||.|.|:|.||||:||||...|.         .|:|||:.::::
Human  1128 SQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKE 1191

  Fly  1784 QQQQQQQQQQAAAAQQAAQQA--------------KMKAELKPPYA-----------DTPALRQL 1823
            ::::::::::|..|.:|:..|              .|:...:||..           ||||||.|
Human  1192 REREREREREAERAAKASSSAHEGRLSDPQLSGPGHMRPSFEPPPTTIAAVPPYIGPDTPALRTL 1256

  Fly  1824 SEYARPHV------------AFSPVEQMVPYHHP----MGPMYRERELEEIKNAQAAAASQS--- 1869
            ||||||||            ..:|.:.::.||.|    :.|..|||||.|.:..:.....:.   
Human  1257 SEYARPHVMSPTNRNHPFYMPLNPTDPLLAYHMPGLYNVDPTIRERELREREIREREIRERELRE 1321

  Fly  1870 -----------RLDP-----HWMEYYRR----------GIHPSQFPLYANPAISQMERERLGIPP 1908
                       .|||     :.||::.|          |.||  |..: :|.::.:|||||.:..
Human  1322 RMKPGFEVKPPELDPLHPAANPMEHFARHSALTIPPTAGPHP--FASF-HPGLNPLERERLALAG 1383

  Fly  1909 PHHVGLDP--------------GEHMIRLTRE---------------YHAHSHTHLHL------- 1937
            |.   |.|              .|.|..||.:               .|:|.|:||||       
Human  1384 PQ---LRPEMSYPDRLAAERIHAERMASLTSDPLARLQMFNVTPHHHQHSHIHSHLHLHQQDPLH 1445

  Fly  1938 -----PLHPQPQPPEAGFQLPPNVGQYP-----RPNMLIPREPHSDVLLR--------------- 1977
                 |:||...|..||    |::.::|     .||.|:.:.||...:||               
Human  1446 QGSAGPVHPLVDPLTAG----PHLARFPYPPGTLPNPLLGQPPHEHEMLRHPVFGTPYPRDLPGA 1506

  Fly  1978 ----MSYADQLQ--YLQAAEFQRQSLHDQY 2001
                ||.|.|||  :.|:||.||.::..|:
Human  1507 IPPPMSAAHQLQAMHAQSAELQRLAMEQQW 1536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GugNP_001261581.1 ELM2 9..68 CDD:279754 31/58 (53%)
SANT 125..172 CDD:197842 33/46 (72%)
SANT_MTA3_like 126..171 CDD:212559 31/44 (70%)
Sec_Non_Glob 344..>440 CDD:275213 22/96 (23%)
RERENP_001036146.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..90
BAH_MTA 102..307 CDD:240060 19/30 (63%)
ELM2 286..336 CDD:279754 31/58 (53%)
SANT_MTA3_like 395..440 CDD:212559 31/44 (70%)
SANT 396..441 CDD:197842 32/44 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 464..495 11/57 (19%)
ZnF_GATA 503..552 CDD:214648 13/99 (13%)
ZnF_GATA 506..560 CDD:238123 14/70 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 542..1133 246/1413 (17%)
Atrophin-1 568..1565 CDD:281189 358/1799 (20%)
ICA69 627..793 CDD:282483 70/536 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1162..1246 16/83 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147633
Domainoid 1 1.000 178 1.000 Domainoid score I3568
eggNOG 1 0.900 - - E1_KOG2133
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 312 1.000 Inparanoid score I2586
Isobase 1 0.950 - 0.918296 Normalized mean entropy S7094
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003731
OrthoInspector 1 1.000 - - otm41313
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13859
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5144
SonicParanoid 1 1.000 - - X2587
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1110.960

Return to query results.
Submit another query.