DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)02640 and HEM3

DIOPT Version :9

Sequence 1:NP_612103.1 Gene:l(3)02640 / 46140 FlyBaseID:FBgn0010786 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_010076.1 Gene:HEM3 / 851322 SGDID:S000002364 Length:327 Species:Saccharomyces cerevisiae


Alignment Length:299 Identity:114/299 - (38%)
Similarity:176/299 - (58%) Gaps:11/299 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KVIRVGSRKSELALIQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGEKSLFTRDLED 70
            :.:.:|.|||:||:||:.||:..:::.||....::.|:.|.||::....|...|.|:|:|::|||
Yeast     4 ETLHIGGRKSKLAVIQSNHVLKLIEEKYPDYDCKVFTLQTLGDQIQFKPLYSFGGKALWTKELED 68

  Fly    71 ALRNGG----VDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHTIASLPKGSVIG 131
            .|.:..    :|.:||||||:||.||.|..:|.:.:|.|..|.||:.......::..||.|.::|
Yeast    69 HLYHDDPSKKLDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLVMPFYSAYKSLDDLPDGGIVG 133

  Fly   132 TSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAGLVRMGWMSRISQVLEP 196
            |||:||:||::|.||||....:|||:.|||.|||...|.:..||||.|||:|||..:||:|....
Yeast   134 TSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIILASAGLMRMGLENRITQRFHS 198

  Fly   197 TDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERSFLKTLGGGCSAPVAVWSNLKG 261
            ..:.:|||||||.:|.|..|.:::.:|.::..||.|...|:||:.::||.||||.|:.|.|..  
Yeast   199 DTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCLSERALMRTLEGGCSVPIGVESKY-- 261

  Fly   262 EPLNGNSQEVGLSLTGAVWSLDGAIEIRNHLACALNEQK 300
                 |.:...|.|...|..::|...:.:.:...:...|
Yeast   262 -----NEETKKLLLKAIVVDVEGTEAVEDEIEMLIENVK 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)02640NP_612103.1 hemC 6..289 CDD:234612 113/286 (40%)
PBP2_HuPBGD_like 7..296 CDD:270363 113/292 (39%)
HEM3NP_010076.1 PBP2_HuPBGD_like 5..291 CDD:270363 113/292 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345158
Domainoid 1 1.000 177 1.000 Domainoid score I725
eggNOG 1 0.900 - - E1_COG0181
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H158
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004130
OrthoInspector 1 1.000 - - oto99617
orthoMCL 1 0.900 - - OOG6_101048
Panther 1 1.100 - - LDO PTHR11557
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R556
SonicParanoid 1 1.000 - - X2873
TreeFam 1 0.960 - -
1211.730

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