DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pfdn2 and GIM4

DIOPT Version :10

Sequence 1:NP_729659.1 Gene:Pfdn2 / 46121 FlyBaseID:FBgn0010741 Length:143 Species:Drosophila melanogaster
Sequence 2:NP_010913.2 Gene:GIM4 / 856715 SGDID:S000000729 Length:111 Species:Saccharomyces cerevisiae


Alignment Length:101 Identity:38/101 - (37%)
Similarity:55/101 - (54%) Gaps:4/101 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 FQQLRNEQRNLVNSLNT----LEMDLREHKTVIETLEAADPERKCFRQIGGVLCERTVKEVLPQL 79
            ||...||.:.::..|.|    |..|..||..||:||:.|:|.|||:|.|||.|.|..|:..||.|
Yeast     8 FQAKYNEYKQILEELQTKIIELGHDKDEHTIVIKTLKDAEPTRKCYRMIGGALVESDVQTSLPIL 72

  Fly    80 VENKDFIAKTIQMVTNDLSKKGSELNKFKEEHNIKI 115
            ...|:.|..||..:...|.:...|..|:|:::.|::
Yeast    73 ETKKENIEGTISKMKETLIQTAKEFEKWKKDNKIQV 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pfdn2NP_729659.1 Prefoldin_2 14..113 CDD:467479 37/97 (38%)
coiled coil 14..53 CDD:467479 14/37 (38%)
coiled coil 73..113 CDD:467479 11/39 (28%)
GIM4NP_010913.2 Prefoldin_2 9..106 CDD:467479 36/96 (38%)
coiled coil 9..46 CDD:467479 13/36 (36%)
coiled coil 66..106 CDD:467479 11/39 (28%)

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