Sequence 1: | NP_652039.2 | Gene: | Nup214 / 46091 | FlyBaseID: | FBgn0010660 | Length: | 1711 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_956979.2 | Gene: | nup98 / 777756 | ZFINID: | ZDB-GENE-040426-1180 | Length: | 1814 | Species: | Danio rerio |
Alignment Length: | 677 | Identity: | 177/677 - (26%) |
---|---|---|---|
Similarity: | 249/677 - (36%) | Gaps: | 226/677 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 1072 NKSFG--FGGFTGTGGTVGNTSSSPFSFGGLGSSLGFGGTAAAVPKSEPSSTATTSVATSASTAP 1134
Fly 1135 FGIFSAALAKPSNSEPITTVTSNTTTITSKPTNVIASSSVTDAPSVTTTNAVTSSTDP-IGGLFS 1198
Fly 1199 SVTICKPNTPADTTKPANI--FGGGLSAG---------SFSFGGTIDASKGLFGSTKPVATAPTS 1252
Fly 1253 VTEANNKTDPISTTPSAISTTTAT-----TTV--------------------SSPAVVPAAV--- 1289
Fly 1290 ---TAAVPATSST-TVTSSTAVPGSAFSFSNAFSTLSAGGAAAPTTSASAPLAAKSPTATSTGNN 1350
Fly 1351 SSNSVFGGGFAVATSTAAPVASPFQSAAKSPVSSANIFGSIPKAETSVFGGATTAPSNTTAAATP 1415
Fly 1416 DAPPA------GLFASAAISNPSPFGSPTTRAPASGGNIFGQAVKPSVFGQPAQAGDSGGSIFGG 1474
Fly 1475 GSASTPFG-SSSIFGGGNTQGAVGAPAAGSTSIFGQKV--FGQSSAAAPA--AGGNIFSNPVGSP 1534
Fly 1535 QASPFGGGGNSIFGSPATAPPASGGSIFGGGSSSGGFGSFTQTTPAQG-GFGGGFGQGGGGSVAQ 1598
Fly 1599 TG-FGSPQAPQQQTTTPGGFGAKPVFGGSPAFGASPTFGGGAT---FGSPKGFGGFGGASPVASP 1659
Fly 1660 PPFGAAAKPAQGNIFETLGGQESGLSF 1686 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup214 | NP_652039.2 | WD40 | <31..>233 | CDD:225201 | |
WD40 repeat | 38..86 | CDD:293791 | |||
WD40 repeat | 90..131 | CDD:293791 | |||
WD40 repeat | 139..173 | CDD:293791 | |||
nup98 | NP_956979.2 | Nucleoporin_FG | 39..133 | CDD:290362 | 29/108 (27%) |
Nucleoporin_FG | 217..357 | CDD:290362 | 46/219 (21%) | ||
Nucleoporin_FG | 324..>400 | CDD:290362 | 29/119 (24%) | ||
Nucleoporin2 | 741..881 | CDD:282016 | |||
Nup96 | 1333..1626 | CDD:288926 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |