| Sequence 1: | NP_652039.2 | Gene: | Nup214 / 46091 | FlyBaseID: | FBgn0010660 | Length: | 1711 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_082873.2 | Gene: | Thoc3 / 73666 | MGIID: | 1920916 | Length: | 351 | Species: | Mus musculus |
| Alignment Length: | 254 | Identity: | 52/254 - (20%) |
|---|---|---|---|
| Similarity: | 84/254 - (33%) | Gaps: | 87/254 - (34%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 55 PELKVIIVKDLVNAKSTAQQPQARLVPLPSIPNYIACSSDGNLLAVNHTQNGTSLLSIYAVLSF- 118
Fly 119 MTPDVRPVYNIRLAAEDHVHG-----VQLLWNPVLPNSLAVVLSNGALAMYALK----------E 168
Fly 169 GGNFEMHSLDKNQQVKCGCWSPKGKQIVLGFPGGTV-------------KQFKPDLTLAKTLLCP 220
Fly 221 PNIHDAPFDTIAIQWLSTFQFAVIFLQHGEDCSPSLYILNAPKAGAPSYINYYD---IC 276 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Nup214 | NP_652039.2 | WD40 | <31..>233 | CDD:225201 | 39/206 (19%) |
| WD40 repeat | 38..86 | CDD:293791 | 6/30 (20%) | ||
| WD40 repeat | 90..131 | CDD:293791 | 10/41 (24%) | ||
| WD40 repeat | 139..173 | CDD:293791 | 8/48 (17%) | ||
| Thoc3 | NP_082873.2 | WD40 | <46..329 | CDD:225201 | 49/239 (21%) |
| WD40 | 49..290 | CDD:238121 | 48/236 (20%) | ||
| WD 1 | 53..94 | 15/59 (25%) | |||
| WD40 repeat | 59..97 | CDD:293791 | 14/56 (25%) | ||
| WD 2 | 97..137 | 6/39 (15%) | |||
| WD40 repeat | 102..139 | CDD:293791 | 5/36 (14%) | ||
| WD 3 | 139..178 | 10/50 (20%) | |||
| WD40 repeat | 145..180 | CDD:293791 | 8/46 (17%) | ||
| WD 4 | 180..221 | 13/64 (20%) | |||
| WD40 repeat | 185..221 | CDD:293791 | 9/40 (23%) | ||
| WD 5 | 222..261 | 2/8 (25%) | |||
| WD40 repeat | 227..263 | CDD:293791 | 2/3 (67%) | ||
| WD 6 | 264..303 | ||||
| WD40 repeat | 269..295 | CDD:293791 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||