Sequence 1: | NP_652039.2 | Gene: | Nup214 / 46091 | FlyBaseID: | FBgn0010660 | Length: | 1711 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038960678.1 | Gene: | Nup214 / 296634 | RGDID: | 1304977 | Length: | 2085 | Species: | Rattus norvegicus |
Alignment Length: | 2196 | Identity: | 578/2196 - (26%) |
---|---|---|---|
Similarity: | 854/2196 - (38%) | Gaps: | 627/2196 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 DTQDFQFKLHHKIVAFKKCGE-PRSNVNLLAVSSSRGLLFAGSPTQPELKVIIVKDLVNAKSTAQ 73
Fly 74 QP-------QARLVPLPSIPNYIACSSDG-NLLAVNHTQNGTSLLSIYAVLSFMT---PDVRP-- 125
Fly 126 VYNIRLAAEDHVHGVQLLWNPVLPNSLAVVLSNGALAMYALKEGGNFEMHSLDKNQQVKCGCWSP 190
Fly 191 KGKQIVLGFPGGTVKQFKPDLTLAKTLLCPPNIH-DAPFDTIAIQWLSTFQFAVIFLQHGED--- 251
Fly 252 --CSPSLYILNAPKAGAPS---YINYYDICYSMNGPRNHQFVFSHVPQWNLLLVVSANGVEVGIM 311
Fly 312 RSTEAGDTPAWQQLTLLDEARIEMPLSEDKDETFPLGFAFDTSTTHQLTINEKK-LQTMPMVHVL 375
Fly 376 SSDGELLSFNFLNVLPTAVSV----------------------CSPPPPVADTSGQFKPLNMLLA 418
Fly 419 SEEEEQPAWAASP----SKAPAAT---PAASSDIS-FAFTPNTVTSTPAPSKDKQPSLFSGFGAA 475
Fly 476 AAKAPAPQLSFGTAP----TSSPVSFGAPTTNAAKPTTPFGGFG----------TQATTTAMGSM 526
Fly 527 FSASGANA-------FGGMALNKPAIASVTPRTAAPGSTVPATPASAPANKPLYTVPLTFTP--V 582
Fly 583 DTKPATSAPPQIA-------------------------------DESLKPDDTE----------P 606
Fly 607 IIKDMIALQIEAFSKDIQKQKEQTKELLKGIAAPSALRAYAKRLDDLQ----ELNEQAKDVEFEL 667
Fly 668 DVQGLRQGLNEAYAIVAECR---------GKLE-IYRKPEITRLMNSSSCDPSGRRML---ARLQ 719
Fly 720 SYVAANEAQLRLAQQHV----DLQWEQFQDVVRRNSKSRMHMPCLEGIYQRLTRLQNLTSNQRIV 780
Fly 781 QNNIKSKLKERGLLQAALLDQ----EKSRTRTNEAVDTLTDSILTMSLSQVVDSNA-------AK 834
Fly 835 LTRERLQKIRNIVQLQKINVICPQRPDRVGLKSEVILETKRRAEQIKRAAAKPATANKYTQAAVA 899
Fly 900 PPSPPDVAPTP------AVAPMPQATVTVAPP------LPKPMPSIPSVVEKPGVPTHPTTPVAT 952
Fly 953 PFSFSQS----IPFVKTSTVTPTTNTVTPGEAAKPGLSIFGGSTISSFSFGGGAAKSAL--SFGT 1011
Fly 1012 GSPAVAAPT-------------------PKP-------------------------NPLSAVEKP 1032
Fly 1033 ----TP---------------EPTKPKEQKAAESKEFKAVQPET--EESKVPQKPKAETENKSFG 1076
Fly 1077 F----------------GGFTGTGGTVGNTSSS----PFSFGGLGSSLGF-----GGTAAAVPKS 1116
Fly 1117 EPS-STATTSVATSASTAPFGIFSAALAKPSNSE-PITTVTSNTTTITSKPTNVIASSS------ 1173
Fly 1174 -------VTDAPSVTTTNAVTSSTD--------PIGGLF-----------SSVTICKPNTP---- 1208
Fly 1209 --ADTTKPANIFG-----GGLSAGSFSF-GGTIDASKG--LFGSTKPVATAPTSVTEANNKTDP- 1262
Fly 1263 ------------ISTTPSA----ISTTTATTTVSSPAV--------------------------- 1284
Fly 1285 -------------VPAAVTAAVPATSSTTV--TSSTAV-PGSAFSFSNAFS-------------- 1319
Fly 1320 --TLSAGGAAAP---TTSASAPLAAKSPT-ATSTG----NNSSNSVFGGGFAVATSTA------- 1367
Fly 1368 ---APVASPF---------QSAAKSPVSSAN-------------IFGSIPKAETSVFGGATTAPS 1407
Fly 1408 N----------------TTAAATPDAPPAGLF-ASAAISNPS--PFGSPTTRAPASGGNIFGQAV 1453
Fly 1454 KPSVFGQPAQAGDSGGSIFGGGSAST----PFGSS----SIFGGGNTQGAVGAPAAGSTSIFGQK 1510
Fly 1511 -------VFGQSSAAAPAAGGNIFSNPVGSP-----QASPF--GGGGNSIFGSPATAPPASGGSI 1561
Fly 1562 FG--GGSSSGGFG-SFTQTTPAQGGFGGGFGQGGGGSVAQTGFGSPQAPQQQTTTP---GGFGAK 1620
Fly 1621 PVFGGSPAFGASPTFGGGATFG------SPKG------FG-----------GFGGASPVAS---- 1658
Fly 1659 ----PPPFGAAAKPAQGNIFETLGGQESGLSFGNLAQT-GNSNAQKPAFGG 1704 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup214 | NP_652039.2 | WD40 | <31..>233 | CDD:225201 | 62/215 (29%) |
WD40 repeat | 38..86 | CDD:293791 | 16/54 (30%) | ||
WD40 repeat | 90..131 | CDD:293791 | 11/46 (24%) | ||
WD40 repeat | 139..173 | CDD:293791 | 8/33 (24%) | ||
Nup214 | XP_038960678.1 | WD40 | 23..>216 | CDD:421866 | 59/206 (29%) |
WD40 repeat | 39..86 | CDD:293791 | 16/53 (30%) | ||
WD40 repeat | 96..147 | CDD:293791 | 11/56 (20%) | ||
WD40 repeat | 152..189 | CDD:293791 | 7/36 (19%) | ||
ANAPC4_WD40 | 155..>216 | CDD:403945 | 22/60 (37%) | ||
WD40 repeat | 196..230 | CDD:293791 | 14/34 (41%) | ||
WD40 repeat | 243..291 | CDD:293791 | 13/55 (24%) | ||
WD40 repeat | 304..350 | CDD:293791 | 13/45 (29%) | ||
PHA03247 | <425..688 | CDD:223021 | 83/338 (25%) | ||
PHA03247 | <1126..1603 | CDD:223021 | 183/683 (27%) | ||
COG5651 | <1784..2081 | CDD:227938 | |||
Nup214_FG | 1913..1972 | CDD:408399 | |||
Nucleoporin_FG2 | <1947..2053 | CDD:406391 |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3630 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0006508 | |
OrthoInspector | 1 | 1.000 | - | - | oto96859 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106765 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X5483 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
8 | 7.670 |