DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup214 and Thoc3

DIOPT Version :9

Sequence 1:NP_652039.2 Gene:Nup214 / 46091 FlyBaseID:FBgn0010660 Length:1711 Species:Drosophila melanogaster
Sequence 2:NP_001099529.1 Gene:Thoc3 / 290519 RGDID:1311669 Length:351 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup214NP_652039.2 WD40 <31..>233 CDD:225201
WD40 repeat 38..86 CDD:293791
WD40 repeat 90..131 CDD:293791
WD40 repeat 139..173 CDD:293791
Thoc3NP_001099529.1 WD40 49..290 CDD:238121
WD40 repeat 59..97 CDD:293791
WD40 repeat 102..139 CDD:293791
WD40 repeat 145..180 CDD:293791
WD40 repeat 185..221 CDD:293791
WD40 repeat 227..263 CDD:293791
WD40 repeat 269..295 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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