| Sequence 1: | NP_652039.2 | Gene: | Nup214 / 46091 | FlyBaseID: | FBgn0010660 | Length: | 1711 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001274093.1 | Gene: | Nup98 / 269966 | MGIID: | 109404 | Length: | 1816 | Species: | Mus musculus |
| Alignment Length: | 741 | Identity: | 198/741 - (26%) |
|---|---|---|---|
| Similarity: | 257/741 - (34%) | Gaps: | 242/741 - (32%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1072 NKSFG--FGGFTGTGGTVG----NTSSSPFSFGGLGSSLGFGGTAAAVPKSEPSSTATTSVATSA 1130
Fly 1131 STAPFGIFSAALAKPSNSEPITTVTSNTTTITSKPTNVIASSSVTDAPSVTTTNAVTSSTDPIGG 1195
Fly 1196 LFSSVTICKPNTPADTTKPANIFGGGLSAGSFSFGGTIDASKGLFGSTKPVATAPTSVTEANNKT 1260
Fly 1261 DPISTTPSAISTTTATTTVSSPAVVPAAVTAAVPATSSTTV-TSSTAVPGSAFSFSNAFSTL--- 1321
Fly 1322 -----------SAGGAAAPTTSASAPLAAKSP-TATSTG---NNSSNSVFGGG---FAVATSTAA 1368
Fly 1369 PVASPFQSAAKSPVSSANIFGSIPKAETSV----FGGATTAPS------NTTAAATPDAPPAGLF 1423
Fly 1424 ASAAISNPSPFGSPTTRAPASGGNIFGQAVKPSVFGQPAQAGDSGGSIFGGGSASTPFGSSSIFG 1488
Fly 1489 GGNTQGAVGAPAAGSTSIFGQK---VFGQSSAAAPAAG---GNIFSN----PVG-SPQASPFGGG 1542
Fly 1543 ----GNSIFGS-PATAPPASG-GSIFGGGSSSGGFGSFTQTTPAQGG-FG-GGFGQGG-GGSVAQ 1598
Fly 1599 TGFGSPQAPQQQTTTPGGFGAKPV--------FGGSPAFGASPTFGGGATFGSPKGFGGFGGASP 1655
Fly 1656 VASP--------PPFGAAAK---------------------------PAQGNIFETLGGQESGLS 1685
Fly 1686 FGN-----------LAQTGNSNAQKP 1700 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Nup214 | NP_652039.2 | WD40 | <31..>233 | CDD:225201 | |
| WD40 repeat | 38..86 | CDD:293791 | |||
| WD40 repeat | 90..131 | CDD:293791 | |||
| WD40 repeat | 139..173 | CDD:293791 | |||
| Nup98 | NP_001274093.1 | FG repeats 1 | 1..156 | 57/189 (30%) | |
| Nucleoporin_FG | 40..149 | CDD:372653 | 37/145 (26%) | ||
| GLEBS, interaction with RAE1. /evidence=ECO:0000250 | 157..213 | 12/58 (21%) | |||
| FG repeats 2 | 214..480 | 95/320 (30%) | |||
| Nucleoporin_FG | 239..332 | CDD:372653 | 29/117 (25%) | ||
| Nucleoporin_FG | 329..466 | CDD:372653 | 52/160 (33%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 512..535 | 8/40 (20%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 663..682 | ||||
| Nucleoporin2 | 740..880 | CDD:367810 | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 886..937 | ||||
| Nup96 | 1333..1622 | CDD:371903 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.910 | |||||