Sequence 1: | NP_652039.2 | Gene: | Nup214 / 46091 | FlyBaseID: | FBgn0010660 | Length: | 1711 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_492568.1 | Gene: | npp-14 / 172813 | WormBaseID: | WBGene00003800 | Length: | 1390 | Species: | Caenorhabditis elegans |
Alignment Length: | 1794 | Identity: | 400/1794 - (22%) |
---|---|---|---|
Similarity: | 641/1794 - (35%) | Gaps: | 571/1794 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 APDCEDTQDFQFKLHHKIVAF--KKCGEPRSNVNL---LAVSSSRGLLFAGSPTQPELKVIIVKD 64
Fly 65 LVNAKSTAQQPQARLVPLP---------SIPNYIACSSDGNLLAVNHTQNGTSLLSIYAVLSFMT 120
Fly 121 PD----VRPVYNIRLAAEDHVHGVQLLWNPVLPNSLAVVLSNGAL--AMYALKEGGNFEMHSLDK 179
Fly 180 NQQVKCG-CWSPKGKQIVLGFPGGTVKQFKPDLTLAKTLLCPPNIHDAPFDTIAIQWLSTFQFAV 243
Fly 244 IFLQHGEDCSPSLYILNAPKAGAPSYINYYDICYSMNG--------PRNHQFVFSHVPQWNLLLV 300
Fly 301 VSANGVEVGIMRSTEAGDTPAWQQLTLLDEARIEMPLSEDKDETFPLGFAFDTSTTHQLTIN--- 362
Fly 363 EKKLQTMPMVHVLSSDGELLSFNFLNVLPTAVSVCSPPPPVADTSGQFKPLNMLLASEEEEQPAW 427
Fly 428 AASPSKAPAATPAASSDISFAFTPNTVTSTPAPSKDKQPSLFSGFGAAAAKAPAPQLSFGTAPTS 492
Fly 493 SPVSFGAPTTNAAKPTTPFGGFGTQATTTAMGSMFSASGANAFGGMALNKPAIASVTPRTAAPGS 557
Fly 558 TVPATPASAPANKPLYTVPLTFTPVDTKPATSAPPQIADESLKPDDTEPII--KDMIALQIEAFS 620
Fly 621 KDIQKQKEQTKELLKGI------------AAPSALRAYAKRLDDLQEL-----------NEQAKD 662
Fly 663 VEFELDVQ-GLRQGLNEAYAIVAECRG-----KLEIYRKPE----------------ITRLMNSS 705
Fly 706 SCDPSGR--------RMLARLQSYVAANEAQLRLAQ---------------QHVDLQWEQFQ-DV 746
Fly 747 VRRNSK---------SRMHMPCLEGIY---QRLTRLQNLTSNQRIVQNNIKSK--LKERGLLQAA 797
Fly 798 LLDQEKSRTRTNEAVDT--LTDSILTMSLSQVVDSNAAKLTRERLQKIRNIVQLQKINVICPQRP 860
Fly 861 DRVGLKSEVILETKRRAEQIKRAAAKPATANKYTQAAVAPPSPPDVAPTPAVAPMPQATVTVAPP 925
Fly 926 LPKPMPSIPSVVEKPGVPTHPTTPVATPFSFSQSIPFVKTSTVTPTTNTVTP-----------GE 979
Fly 980 AAKPGLSIFGGSTI-SSFSFGGGAAKSAL------SFGTGSPAVAAPTPKPNPLSAVEKPT---- 1033
Fly 1034 ----PEPTKPKEQKAAESKEFKAVQPETEESKVPQKPK--AETENKSFGFGGFTGTGGTVGNTSS 1092
Fly 1093 SPFSFGGLGSSLGFGGTAAAVPKSEPSSTATTSVATSASTAPFGIFSAALAKPSNSEPITTVTSN 1157
Fly 1158 TTTITSKPTNVIASSSVTDAPSVTTTNAVTSSTDPIGGLFSSVTICKPNTPADTTKPANIFGGGL 1222
Fly 1223 SAGSFSFGGTIDASKGLFGST--KPVATAPTSVTEANNKTDPISTTPSAISTTTATTTVSSPAVV 1285
Fly 1286 PAAVTAAVPATSSTTVTSSTAVPGSAFSFSNAFSTLSAGGAAAPTTSASAPLAAKSPTATSTGNN 1350
Fly 1351 SSNSVFGGGFAVATSTAAPVASPFQSAAKSPVSSANIFGSIPKAETSVFGGATTAPSNTTAAATP 1415
Fly 1416 DAPPAGLFASAAISNPSPFGSPTTRAPASGGNIFGQAVKPSVFGQPAQAGDSGGSIFGGGSASTP 1480
Fly 1481 -FGSSSIFGGGNTQGAVGAPAAGSTSIFGQKVFGQSSAAAPAAGGNIFSNPVGSPQASPFGGGGN 1544
Fly 1545 SIFGSPATAPPASGGSIFGGGSSSGGFGSFTQTTPAQGGFGGGFGQGGGGSVAQTGFGSPQAPQQ 1609
Fly 1610 QTTTPGGFGAKPVFGGSPAFGASPT---FGGGATFGSPK 1645 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup214 | NP_652039.2 | WD40 | <31..>233 | CDD:225201 | 53/220 (24%) |
WD40 repeat | 38..86 | CDD:293791 | 12/56 (21%) | ||
WD40 repeat | 90..131 | CDD:293791 | 10/44 (23%) | ||
WD40 repeat | 139..173 | CDD:293791 | 9/35 (26%) | ||
npp-14 | NP_492568.1 | NUP214 | <271..400 | CDD:293360 | 30/140 (21%) |
SMC_N | <532..>757 | CDD:330553 | 40/224 (18%) | ||
Nucleoporin_FG | 1109..>1186 | CDD:316182 | 35/155 (23%) | ||
Nucleoporin_FG | 1289..1373 | CDD:316182 | 37/137 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160167252 | |
Domainoid | 1 | 1.000 | 188 | 1.000 | Domainoid score | I1952 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3630 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 189 | 1.000 | Inparanoid score | I2580 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG46620 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0006508 | |
OrthoInspector | 1 | 1.000 | - | - | oto19028 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106765 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R851 |
SonicParanoid | 1 | 1.000 | - | - | X5483 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.780 |