DRSC/TRiP Functional Genomics Resources

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Protein Alignment MYC and RTG3

DIOPT Version :9

Sequence 1:NP_002458.2 Gene:MYC / 4609 HGNCID:7553 Length:454 Species:Homo sapiens
Sequence 2:NP_009447.1 Gene:RTG3 / 852171 SGDID:S000000199 Length:486 Species:Saccharomyces cerevisiae


Alignment Length:333 Identity:73/333 - (21%)
Similarity:111/333 - (33%) Gaps:90/333 - (27%)


- Green bases have known domain annotations that are detailed below.


Human   170 ARKDSGSPNPARGHSVCSTSSLYLQD-----------------------LSAAASECIDPSV--V 209
            ||.:|.:|..:..:....:.|.||.|                       |.::.|...|..|  .
Yeast    83 ARSNSQTPTASTIYEEAESQSSYLDDMFRTSQGGRPVTQNSISSIGQGPLRSSYSMAYDSPVDRA 147

Human   210 FPYPLNDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPEPLVLHEETPPTTSSDSEEEQEDE 274
            ...||......|:....|......:.|::.:.|:.........:.....||.|.||..   ..:.
Yeast   148 MNTPLQQQEGLKAELPHDFLFQHGTDDTMYNLTDDLSSSLSSSINSDMMTPNTYSSSF---SYNP 209

Human   275 EEIDVVSVEKRQAPGKRSESGSPSAGGHSKPPHSPLVLKRCHVSTHQHNYAAPPSTRKDYPAAKR 339
            :.:...||....:|..||.|.|..||....             |:.:|.....|.||.       
Yeast   210 QSLGPASVSSTYSPKVRSPSSSFRAGSFLS-------------SSFRHGSINTPRTRH------- 254

Human   340 VKLDSVRVLRQISNNR----------KCTSPRSSDTEENVKRRTHNVLERQRRNELKRSFFALRD 394
                     ..||:|.          |.....:||.:...||..||.:||:||..:|:....|..
Yeast   255 ---------TSISSNMTENIGPGSVPKILGGLTSDEKLRRKREFHNAVERRRRELIKQKIKELGQ 310

Human   395 QIP-------ELENNEKAPKVVILKKATAY------ILSVQAEEQKLISEEDLLRKRREQLKHKL 446
            .:|       :|....|..|.:||.:...|      ||.:||.::|.     ||.|.:|     |
Yeast   311 LVPPSLLNYDDLGKQIKPNKGIILDRTVEYLQYLAEILEIQARKKKA-----LLAKIKE-----L 365

Human   447 EQLRNSCA 454
            |:.::|.|
Yeast   366 EEKKSSVA 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYCNP_002458.2 Myc_N 21..360 CDD:279405 41/224 (18%)
HLH 370..426 CDD:238036 21/68 (31%)
Myc-LZ 423..453 CDD:280500 8/29 (28%)
RTG3NP_009447.1 bHLHzip_USF_MITF 289..349 CDD:381393 16/59 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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