DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MYC and myc

DIOPT Version :9

Sequence 1:NP_002458.2 Gene:MYC / 4609 HGNCID:7553 Length:454 Species:Homo sapiens
Sequence 2:NP_989390.1 Gene:myc / 395024 XenbaseID:XB-GENE-6052814 Length:418 Species:Xenopus tropicalis


Alignment Length:469 Identity:281/469 - (59%)
Similarity:326/469 - (69%) Gaps:87/469 - (18%)


- Green bases have known domain annotations that are detailed below.


Human    16 MPLNVSFTNRNYDLDYDSVQPYFYCDEEENFYQQQQQSELQPPAPSEDIWKKFELLPTPPLSPSR 80
            ||||.:|.::|||.||| :||.|:..||||||  .|||.||||||||||||||||||||||||||
 Frog     1 MPLNANFPSKNYDYDYD-LQPCFFFLEEENFY--HQQSRLQPPAPSEDIWKKFELLPTPPLSPSR 62

Human    81 RSGLCSPSYVAVTPFSLRGDNDGGGGSFSTADQLEMVTELLGGDMVNQSFICDPDDETFIKNIII 145
            ||     |..::.|              |||||||||||.||||||||||||:.|||..:|:|:|
 Frog    63 RS-----SQSSLFP--------------STADQLEMVTEFLGGDMVNQSFICEADDEALLKSIVI 108

Human   146 QDCMWSGFSAAAKL---VSEKLASYQAARKDSG-------SP---NPARGHSVCSTSSL------ 191
            ||||||||||||||   ||||||||||:||:|.       ||   :|.:..|...:.||      
 Frog   109 QDCMWSGFSAAAKLEKVVSEKLASYQASRKESALSSSQCQSPPEQSPLKSPSCHGSLSLGGTRSS 173

Human   192 --YLQDLSAAASECIDPSVVFPYPLNDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPEPLV 254
              :|||.|   |:|:|||||||||||||.         |:|.||..|.:|               
 Frog   174 HGFLQDPS---SDCVDPSVVFPYPLNDSI---------SNASSPCQDLML--------------- 211

Human   255 LHEETPP----TTSSDSEEEQED-------EEEIDVVSVEKRQAPGKRSESGSPSAGGHSKPPHS 308
               ||||    ::||:||||.||       |||||||:|||||...||.||.|.|.  .|:|.||
 Frog   212 ---ETPPISSNSSSSESEEEPEDEDEDCDEEEEIDVVTVEKRQTASKRMESSSHSQ--PSRPHHS 271

Human   309 PLVLKRCHVSTHQHNYAAPPSTRKDYPAAKRVKLDS-VRVLRQISNNRKCTSPRSSDTEENVKRR 372
            |||||||||..|||||||.|||:.||.::||.||:| .|||:||||||||:||||||:|||.|||
 Frog   272 PLVLKRCHVPIHQHNYAASPSTKVDYVSSKRAKLESNARVLKQISNNRKCSSPRSSDSEENDKRR 336

Human   373 THNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISEEDLLRK 437
            ||||||||||||||.||||||||:||:.|||||||||||||||.|::|:|.:|::||.|.:.|:.
 Frog   337 THNVLERQRRNELKLSFFALRDQVPEVANNEKAPKVVILKKATEYVVSMQEDERRLIRETEQLKY 401

Human   438 RREQLKHKLEQLRN 451
            ||||||.:|:||||
 Frog   402 RREQLKQRLQQLRN 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYCNP_002458.2 Myc_N 21..360 CDD:279405 207/371 (56%)
HLH 370..426 CDD:238036 45/55 (82%)
Myc-LZ 423..453 CDD:280500 16/29 (55%)
mycNP_989390.1 Myc_N 6..324 CDD:366440 207/371 (56%)
bHLHzip_c-Myc 330..413 CDD:381464 60/82 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 345 1.000 Domainoid score I7580
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H31092
Inparanoid 1 1.050 478 1.000 Inparanoid score I7973
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG50300
OrthoDB 1 1.010 - - D221552at32523
OrthoFinder 1 1.000 - - FOG0006386
OrthoInspector 1 1.000 - - oto154895
Panther 1 1.100 - - LDO PTHR45851
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4673
SonicParanoid 1 1.000 - - X7143
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1313.110

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