DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MYC and Myc

DIOPT Version :9

Sequence 1:NP_002458.2 Gene:MYC / 4609 HGNCID:7553 Length:454 Species:Homo sapiens
Sequence 2:NP_036735.2 Gene:Myc / 24577 RGDID:3130 Length:453 Species:Rattus norvegicus


Alignment Length:455 Identity:408/455 - (89%)
Similarity:423/455 - (92%) Gaps:3/455 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDFFRVVENQQPPATMPLNVSFTNRNYDLDYDSVQPYFYCDEEENFYQQQQQSELQPPAPSEDIW 65
            |:|...||| ....||||||||.|||||||||||||||.||||||||.|||||||||||||||||
  Rat     1 MNFLWEVEN-PTVTTMPLNVSFANRNYDLDYDSVQPYFICDEEENFYHQQQQSELQPPAPSEDIW 64

Human    66 KKFELLPTPPLSPSRRSGLCSPSYVAV-TPFSLRGDNDGGGGSFSTADQLEMVTELLGGDMVNQS 129
            ||||||||||||||||||||||||||| |.||.|.|:|||||:|||||||||:||||||||||||
  Rat    65 KKFELLPTPPLSPSRRSGLCSPSYVAVATSFSPREDDDGGGGNFSTADQLEMMTELLGGDMVNQS 129

Human   130 FICDPDDETFIKNIIIQDCMWSGFSAAAKLVSEKLASYQAARKDSGSPNPARGHSVCSTSSLYLQ 194
            |||||||||||||||||||||||||||||||||||||||||||||.|.:||||||||||||||||
  Rat   130 FICDPDDETFIKNIIIQDCMWSGFSAAAKLVSEKLASYQAARKDSTSLSPARGHSVCSTSSLYLQ 194

Human   195 DLSAAASECIDPSVVFPYPLNDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPEPLVLHEET 259
            ||:||||||||||||||||||||||||||.|.||:|||.|||||||| ||||:.:||||||||||
  Rat   195 DLTAAASECIDPSVVFPYPLNDSSSPKSCTSSDSTAFSSSSDSLLSS-ESSPRATPEPLVLHEET 258

Human   260 PPTTSSDSEEEQEDEEEIDVVSVEKRQAPGKRSESGSPSAGGHSKPPHSPLVLKRCHVSTHQHNY 324
            ||||||||||||:||||||||||||||.|.|||||||..:.||||||||||||||||||||||||
  Rat   259 PPTTSSDSEEEQDDEEEIDVVSVEKRQPPAKRSESGSSPSRGHSKPPHSPLVLKRCHVSTHQHNY 323

Human   325 AAPPSTRKDYPAAKRVKLDSVRVLRQISNNRKCTSPRSSDTEENVKRRTHNVLERQRRNELKRSF 389
            |||||||||||||||.||||.|||:||||||||:||||||||||.||||||||||||||||||||
  Rat   324 AAPPSTRKDYPAAKRAKLDSGRVLKQISNNRKCSSPRSSDTEENDKRRTHNVLERQRRNELKRSF 388

Human   390 FALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQLRNSCA 454
            ||||||||||||||||||||||||||||||||||:|.|||||:||||||||||||||||||||.|
  Rat   389 FALRDQIPELENNEKAPKVVILKKATAYILSVQADEHKLISEKDLLRKRREQLKHKLEQLRNSGA 453

Human   455  454
              Rat   454  453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYCNP_002458.2 Myc_N 21..360 CDD:279405 306/339 (90%)
HLH 370..426 CDD:238036 54/55 (98%)
Myc-LZ 423..453 CDD:280500 26/29 (90%)
MycNP_036735.2 Myc_N 20..359 CDD:279405 306/339 (90%)
HLH 366..425 CDD:238036 56/58 (97%)
Myc-LZ 422..451 CDD:280500 25/28 (89%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 628 1.000 Domainoid score I4446
eggNOG 00.000 Not matched by this tool.
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H31092
Inparanoid 1 1.050 795 1.000 Inparanoid score I7571
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG50300
OrthoDB 1 1.010 - - D132262at9347
OrthoFinder 1 1.000 - - FOG0006386
OrthoInspector 1 1.000 - - oto138044
orthoMCL 1 0.900 - - OOG6_115159
Panther 1 1.100 - - LDO PTHR45851
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X7143
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1515.480

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