DRSC/TRiP Functional Genomics Resources

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Protein Alignment MYC and hlh-10

DIOPT Version :9

Sequence 1:NP_002458.2 Gene:MYC / 4609 HGNCID:7553 Length:454 Species:Homo sapiens
Sequence 2:NP_505401.2 Gene:hlh-10 / 191402 WormBaseID:WBGene00001954 Length:202 Species:Caenorhabditis elegans


Alignment Length:218 Identity:49/218 - (22%)
Similarity:81/218 - (37%) Gaps:74/218 - (33%)


- Green bases have known domain annotations that are detailed below.


Human   237 SLLSSTESSPQGSPEPLVLHEETPPTTSSDSEEEQEDEEEIDVVSVEKRQAPGKRSESGSPSAGG 301
            |:|.::.|.||       |.::.||         :.|.:|.|:|...|.:               
 Worm    54 SMLEASASQPQ-------LTQDEPP---------ENDTKENDLVKQNKSE--------------- 87

Human   302 HSKPPHSPLVLKRCHVSTHQHNYAAPPSTRKDYPAAKRVKLDSVRVLRQISNNRKCTSPRSSDTE 366
                             .:..|.:.|..|:.........|:|...|      .:.||        
 Worm    88 -----------------VNDENESTPSPTQNSRRRTSTGKIDRRMV------GKMCT-------- 121

Human   367 ENVKRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISE 431
               :|...|..||.|..:|.:.|..||..:| :|::.|..|:..||.|::||..:.|..|:..::
 Worm   122 ---RRYEANARERNRVQQLSKMFDQLRVCLP-IEDDAKISKLATLKVASSYIGYLGAILQENSND 182

Human   432 EDLLRKRREQLKHKLEQLRNSCA 454
            |:..:|   ||:.:||     ||
 Worm   183 EEEFKK---QLQVELE-----CA 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYCNP_002458.2 Myc_N 21..360 CDD:279405 21/122 (17%)
HLH 370..426 CDD:238036 19/55 (35%)
Myc-LZ 423..453 CDD:280500 8/29 (28%)
hlh-10NP_505401.2 bHLH_SF 121..179 CDD:381792 21/69 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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