DRSC/TRiP Functional Genomics Resources

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Protein Alignment MYC and hlh-30

DIOPT Version :9

Sequence 1:NP_002458.2 Gene:MYC / 4609 HGNCID:7553 Length:454 Species:Homo sapiens
Sequence 2:NP_001023411.1 Gene:hlh-30 / 177157 WormBaseID:WBGene00020930 Length:524 Species:Caenorhabditis elegans


Alignment Length:405 Identity:86/405 - (21%)
Similarity:141/405 - (34%) Gaps:130/405 - (32%)


- Green bases have known domain annotations that are detailed below.


Human   100 DNDGGGGSFS----TADQLEMVTELLGGDMVNQSFICDPDDETFIKNIIIQDCMWSGFSAAAKLV 160
            ::.||||...    .|.|.....:........|.|.   |||.:..|.       |.|...|...
 Worm     6 NSPGGGGGLGLNNPRAQQPPGAQQQQQPQQAQQQFY---DDEPYQANA-------SQFRFGAGKS 60

Human   161 SEKLASYQAARKDSGSPNPARGHSVCSTSSLYLQDLSAAASECIDPSVVFPYPLNDSSSPKSCAS 225
            .|:       |:::|:..|....|:.|||:                    |:   .|:..:|...
 Worm    61 MEQ-------RRETGNLIPIAQRSMGSTST--------------------PF---GSAPTQSYFG 95

Human   226 QDSSAFSPSSDSLLSSTESSPQGSPEPLVLHEETPPTTSSDSEEE-------------------- 270
            ..||..:.||...:..|.....|:.:|   ...:||:..||....                    
 Worm    96 GGSSGAALSSPRKMQQTHQMLFGNIQP---PRGSPPSDGSDKIHRFGESPTPGGVGGVFGTELDD 157

Human   271 --------QEDEEEID-------VVSVEK-----RQAPGKRSESGSPSAGGHSKPPHSPLVLKRC 315
                    .||::.:.       .:..||     |..||..|.:||    |||   .||:.:...
 Worm   158 LIIDELMGMEDDQRMRPGATRPMTIGGEKTMSMARPIPGASSRAGS----GHS---GSPITIPNA 215

Human   316 HVSTHQH--NYAAPPSTRKDYPAAKRVKLDSVRVLRQISNNRKCTSPRSSDTE----ENVKRRTH 374
            ..:..:.  :.:||.|:           :|..:::..:||... .|...:|.|    :..|:..|
 Worm   216 MSNNFRQVVSSSAPTSS-----------IDIEKMIGAVSNGGG-NSGGDNDPEDYYRDRRKKDIH 268

Human   375 NVLERQRRNELKRSFFALRDQIPEL--------ENNEKAPKVVILKKATAYILSVQAE-EQKLIS 430
            |::||:||       :.:.|:|.||        ..:.|..|..|||.:..||..:|.: ||.:.:
 Worm   269 NMIERRRR-------YNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIRVLQKDREQAMKT 326

Human   431 EEDLLRKRREQLKHK 445
            ::.  :|..|...||
 Worm   327 QQQ--QKSLESTAHK 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYCNP_002458.2 Myc_N 21..360 CDD:279405 58/305 (19%)
HLH 370..426 CDD:238036 19/64 (30%)
Myc-LZ 423..453 CDD:280500 6/24 (25%)
hlh-30NP_001023411.1 bHLHzip_MITF_like 260..328 CDD:381403 21/74 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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