DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MYC and mml-1

DIOPT Version :9

Sequence 1:NP_002458.2 Gene:MYC / 4609 HGNCID:7553 Length:454 Species:Homo sapiens
Sequence 2:NP_498631.2 Gene:mml-1 / 176050 WormBaseID:WBGene00003378 Length:1009 Species:Caenorhabditis elegans


Alignment Length:505 Identity:116/505 - (22%)
Similarity:187/505 - (37%) Gaps:129/505 - (25%)


- Green bases have known domain annotations that are detailed below.


Human    16 MPLNVSFTNRNYDLDYDSVQPYFYCDEEENF-----YQQQQQSEL--QP---PAPSEDIWKKFEL 70
            :|:..:.||::: |.:.|....:...::.||     :|...:..|  ||   |.||     :..|
 Worm   444 LPIRNTMTNQHH-LGHTSQHSPWNKQQQSNFLVSLPHQSHVERILNNQPPLVPPPS-----RSNL 502

Human    71 LPT-----------------------PPLSPSRRSGLCSPSYVAV-------TPFSLRGDNDGG- 104
            |||                       |.::|||...|.||...:|       ||..|.  |..| 
 Worm   503 LPTQNDPYLPQFLQSTQPTPQPQSHDPMMAPSRSWWLDSPLTASVQSPLSVATPLPLA--NQTGP 565

Human   105 ----GGSFSTADQLEMVTELLGGDMVNQSFICDPDDETFIKNIIIQDCMWSGFSAAAKLVSEKLA 165
                |....:||.    ..|.||:.....|                  ..||.::....:|::|.
 Worm   566 QTPLGQLIGSADN----GFLFGGNNTPGGF------------------KMSGTTSGVPTLSQRLE 608

Human   166 SYQAARKDSGSPN----PAR------GHSVCSTSSLYLQDLSAAASECIDPSVVFPYPLNDSSS- 219
            ....:|..:...|    |.|      ..:..:.|.|.:..||...:..::.|....:.:..|.: 
 Worm   609 QPPISRTSTIFGNVENKPERIFTSLTSQNTPTPSPLDISSLSRLRTSSLNESWKMSHIVEGSPTY 673

Human   220 ---PKSCASQDSSAFSPSSDSLLSSTESSP-QGSPEPLVLHEETPPTTSSDSEEEQEDEEEIDVV 280
               ..|..::.|...|||:...:|...|.| |.|..|..:  .|||:.||     :..|:|..:.
 Worm   674 QAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKI--ITPPSASS-----KRKEQEAAMA 731

Human   281 SVEKRQAP-------GKRSESGSPSAGGHSKPPHSPLVLKRCHVSTHQHNYAAPPSTRKDYPAAK 338
            .:..||..       ||.:......:|.|..|. :|..||  .|:..:....:.||         
 Worm   732 PLVNRQQSCDVNLLNGKMAVKVEEKSGRHYLPT-TPTELK--EVTKEEPLLMSAPS--------- 784

Human   339 RVKLDSVRVLRQISNNRKCTSPRSSDTEENVKRRTHNVLERQRRNELKRSFFALRDQIPEL-ENN 402
                 ||:.:|:       .:|.|:...|..||..|...|:.||:.||..|..|.|.||:| ...
 Worm   785 -----SVKSMRR-------QAPDSTLHPEERKRILHLHAEQNRRSALKDGFDQLMDIIPDLYSGG 837

Human   403 EKAPKVVILKKATAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQLRNS 452
            .|....|:|.|:..:|..:|||:.....:.|..:.:.|:|..|:..|:::
 Worm   838 VKPTNAVVLAKSADHIRRLQAEKWDKTQKIDEAKAKIEKLNQKITSLQSN 887

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYCNP_002458.2 Myc_N 21..360 CDD:279405 85/405 (21%)
HLH 370..426 CDD:238036 22/56 (39%)
Myc-LZ 423..453 CDD:280500 7/30 (23%)
mml-1NP_498631.2 HLH 801..859 CDD:238036 21/57 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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