DRSC/TRiP Functional Genomics Resources

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Protein Alignment vlc and DLGAP2

DIOPT Version :9

Sequence 1:NP_001163056.1 Gene:vlc / 46078 FlyBaseID:FBgn0259978 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001333739.1 Gene:DLGAP2 / 9228 HGNCID:2906 Length:1055 Species:Homo sapiens


Alignment Length:609 Identity:126/609 - (20%)
Similarity:231/609 - (37%) Gaps:152/609 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DVDADSSDISDTSGSLNFPTPVSVRDITREFTANLRERCVPNLPPQP---------------QHK 63
            :|::.:.|..|..|.....:...:|.|...::.:  :.|:|.:.|..               ..|
Human   550 EVESQAMDALDLPGCFRTRSHSYLRAIQAGYSQD--DECIPMMTPSDITSTIRSTAAVSYTNYKK 612

  Fly    64 TPAYVESRSSELEHMVLSPAI---VECDQEPSSNDFDETSAENSQEAPEKKPSYLNLACCV--NG 123
            ||..|..|::.      .|.|   .:...|.:.:.:.::.|:.....|:......|....:  |.
Human   613 TPPPVPPRTTS------KPLISVTAQSSTESTQDAYQDSRAQRMSPWPQDSRGLYNSTDSLDSNK 671

  Fly   124 YSNLTTYDSKIRQDINKSREVSPIRPSTSSLQYCKRNHFLATPTLHSMPSPATKCKPI------- 181
            ..||....:..::.:.:|:. |.:|.|..::...|....|           .::|..|       
Human   672 AMNLALETAAAQRHLPESQS-SSVRTSDKAILVSKAEELL-----------KSRCSSIGIQDSEF 724

  Fly   182 -----EPNNNSNDSSGNFSSGSG----HSNGNGSFIKQRVERLYGPGALAQGFYSPKKHGQ-SPS 236
                 .|.::...::.:.:...|    ||.|      .:||             ..|:||: ..|
Human   725 PEHQPYPRSDVETATDSDTESRGLREYHSVG------VQVE-------------DEKRHGRFKRS 770

  Fly   237 NAAGRSERGQVEIDSLQGSELARKFKQLSPSKDYG-EFRKKMQKKCSQSTTARID--EPLHSPGL 298
            |:...:.:..:|::...|.         ..::|.| :|....|:....||..:..  ..:.:.||
Human   771 NSVTAAVQADLELEGFPGH---------ITTEDKGLQFGSSFQRHSEPSTPTQYSAVRTVRTQGL 826

  Fly   299 NGDLDLPVFRHLSQEFRAQLPTVSPKRGAPRSCMAPDVLLVDNESSPDHGPTDEVDHESTKMDKL 363
                    |.: .:::|.|:.|         |.:.|          ||......:|         
Human   827 --------FSY-REDYRTQVDT---------STLPP----------PDPWLEPAID--------- 854

  Fly   364 ASEEYISTSNISVEAVVKDGNFFLKILKEEQSRLLVLAALAEKYADALSTNPDISEDTFGLLRSA 428
                .:.|..:|  ...:||::|||:|..|..|:.......|:.|:    ..|:||:..|.:|||
Human   855 ----TVETGRMS--PCRRDGSWFLKLLHAETKRMEGWCKEMEREAE----ENDLSEEILGKIRSA 909

  Fly   429 SGKARLLVSQKMKQFEGLCHNNLNRSPEDKFPTTLDDLQGFWDMVYLQVEHVDSIFADIEKLKSN 493
            .|.|:||:|||.:||..||..|::.|...: ||: .||.|:|||:.|.:|.|...|.::::|:.|
Human   910 VGSAQLLMSQKFQQFYWLCQQNMDPSAMPR-PTS-QDLAGYWDMLQLSIEDVSMKFDELQRLRLN 972

  Fly   494 DWKVKAQSVADQPDLHTIPTKTIKPSKVGVSQVKTVGKASSVRVNGSAPPPPNSAAALKREAQRK 558
            |||: .:|...:.:....|....||.|         ||....|......|...     ::||:|:
Human   973 DWKM-MESPERKEERKVPPPIPKKPPK---------GKFPITREKSLDLPDRQ-----RQEARRR 1022

  Fly   559 LLLEMKRQRREAMTAAAKLNPINV 582
            |:...:.......:|:.:.:.|.:
Human  1023 LMAAKRAASFRQNSASERADSIEI 1046

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vlcNP_001163056.1 GKAP 246..575 CDD:281368 82/331 (25%)
DLGAP2NP_001333739.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000823
OrthoInspector 1 1.000 - - otm41036
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12353
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3941
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
44.130

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