DRSC/TRiP Functional Genomics Resources

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Protein Alignment vlc and DLGAP3

DIOPT Version :10

Sequence 1:NP_524868.1 Gene:vlc / 46078 FlyBaseID:FBgn0259978 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001073887.1 Gene:DLGAP3 / 58512 HGNCID:30368 Length:979 Species:Homo sapiens


Alignment Length:637 Identity:145/637 - (22%)
Similarity:248/637 - (38%) Gaps:151/637 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DADSSDISDTSGSLNFPTPVSVRDITREFTANLRERCVPNLPPQ--PQHKTPAYVESRSSELEHM 78
            |.:|.| ||.|...: |..|:.|..||..::..:.|....:||:  |:...|.|  |||  |...
Human   403 DEESGD-SDGSPKTS-PKAVARRFTTRRSSSVDQARINCCVPPRIHPRSSIPGY--SRS--LTTG 461

  Fly    79 VLSPAIVECDQEPSSNDFDETSAENSQEAPEKKPSYLNLACCVNGYSNLTTYDSKIRQDINKSRE 143
            .||..:.:..:....:.|.|..:: :.:|       |:|..|....|:  :|...|:...::..:
Human   462 QLSDELNQQLEAVCGSVFGELESQ-AVDA-------LDLPGCFRMRSH--SYLRAIQAGCSQDDD 516

  Fly   144 VSPI---------RPSTSSLQYCKRNHFLATPTLHSMPSPATKCKP---IEPNNNSNDSSGNFSS 196
            ..|:         ||. ||..:.|     |.|.:    .|.::..|   |...::::.:..:|::
Human   517 CLPLLATPAAVSGRPG-SSFNFRK-----APPPI----PPGSQAPPRISITAQSSTDSAHESFTA 571

  Fly   197 GSGHSNGNGSFIKQRVERLYGPGALAQGF--------YSPKKHGQSPSNAAGRSERGQ------- 246
            ..|.:....|     .:.|.||...|:..        .|||..........||.|...       
Human   572 AEGPARRCSS-----ADGLDGPAMGARTLELAPVPPRASPKPPTLIIKTIPGREELRSLARQRKW 631

  Fly   247 -----VEIDSLQGSEL----ARKFKQLSPSKDYGEFRKKMQKKCSQSTTARIDEPLHSPGLNG-- 300
                 |:::::..|:.    .|:|..:....:  |.:::.:.|.|.|.||.:...|...||.|  
Human   632 RPSIGVQVETISDSDTENRSRREFHSIGVQVE--EDKRRARFKRSNSVTAGVQADLELEGLAGLA 694

  Fly   301 ---------DLDLPVFRHLSQ-EFRAQLPTVSP------------KRGAPRSCMAPDVLLVDNES 343
                     .......||.|: :...:.||.|.            :.|.|.....|     ..:.
Human   695 TVATEDKALQFGRSFQRHASEPQPGPRAPTYSVFRTVHTQGQWAYREGYPLPYEPP-----ATDG 754

  Fly   344 SPDHGPTDEVDHESTKMDKLASEEYISTSNISV------EAVVKDGNFFLKILKEEQSRLLVLAA 402
            ||...|.......:.:.|     .:|...:.|:      ....:||.:|:|:|:.|..:|.....
Human   755 SPGPAPAPTPGPGAGRRD-----SWIERGSRSLPDSGRASPCPRDGEWFIKMLRAEVEKLEHWCQ 814

  Fly   403 LAEKYADALSTNPDISEDTFGLLRSASGKARLLVSQKMKQFEGLCHNNLNRSPEDKFPT-TLDDL 466
            ..|:.|:    :.::.|:....:|||.|..:||:|||::||..||..:::.:   .||. |..||
Human   815 QMEREAE----DYELPEEILEKIRSAVGSTQLLLSQKVQQFFRLCQQSMDPT---AFPVPTFQDL 872

  Fly   467 QGFWDMVYLQVEHVDSIFADIEKLKSNDWKV---KAQSVADQPDLHTIPTKTIKPSKVGVSQVKT 528
            .||||::.|.:|.|...|.::::||:|.||:   |.:.....|    ||.|.::...|.|.:   
Human   873 AGFWDLLQLSIEDVTLKFLELQQLKANSWKLLEPKEEKKVPPP----IPKKPLRGRGVPVKE--- 930

  Fly   529 VGKASSVRVNGSAPPPPNSAAALKREAQ--RKLLLEMKRQ---RREAMTAAA 575
                             .|..::.|:.|  ||.||..||.   |..:.|.:|
Human   931 -----------------RSLDSVDRQRQEARKRLLAAKRAASFRHSSATESA 965

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vlcNP_524868.1 GKAP <381..>496 CDD:460897 39/115 (34%)
DLGAP3NP_001073887.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 52..95
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..169
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..291
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..429 11/27 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 537..581 8/52 (15%)
GKAP 628..979 CDD:460897 89/381 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 741..790 9/58 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 908..940 8/55 (15%)
Blue background indicates that the domain is not in the aligned region.

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