DRSC/TRiP Functional Genomics Resources

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Protein Alignment vlc and Dlgap5

DIOPT Version :10

Sequence 1:NP_524868.1 Gene:vlc / 46078 FlyBaseID:FBgn0259978 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001411713.1 Gene:Dlgap5 / 218977 MGIID:2183453 Length:820 Species:Mus musculus


Alignment Length:569 Identity:130/569 - (22%)
Similarity:212/569 - (37%) Gaps:144/569 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 FP-TPVSVRDITREF--TANLRERCVPNLPPQPQHKTPAYVESRSSELEHMVLSPAIVECDQEPS 92
            || |....|..|:|:  ...:..|.||......|.:|.   |.:..:.|..|:.|.:.       
Mouse   145 FPHTGRITRSKTKEYMEQTKIGSRNVPKATQSDQRQTS---EKQPLDRERKVMQPVLF------- 199

  Fly    93 SNDFDETSAENSQEAPEKKPSYLNLACCVNGYSNLTTYDSKIRQDINKS---REVSPIRPSTSSL 154
                  ||.:.::.|..::...:           ..|..|..|:.:.::   :....:|||    
Mouse   200 ------TSGKGTESAATQRAKLM-----------ARTVSSTTRKPVTRATNEKGSERMRPS---- 243

  Fly   155 QYCKRNHFLATPTLHSMPSPATKCKP-------IEPNNNSNDSSGNFSSGSGHSNGNGSFIKQRV 212
                          ...|:...:.||       :|.:....||....:|..|..   |.|  :.|
Mouse   244 --------------GGRPAKKPEGKPDKVIPSKVERDEKHLDSQTRETSEMGPL---GVF--REV 289

  Fly   213 ERLYGPG-ALAQGFYSPKKHGQSPSNAAGRSERGQVEIDSLQGSELARKFKQ--LSPSKDYGEFR 274
            |.|  |. |.|||   .::...:|.:...:...|   :.|.|.:.|:.:...  |:|:.|:.:.|
Mouse   290 ESL--PATAPAQG---KERKSFAPKHCVFQPPCG---LKSYQVAPLSPRSANAFLTPNCDWNQLR 346

  Fly   275 KKMQKKCSQSTTARIDEPLHSPGLNGDLDLPVFRHLSQEFRAQLPTVSPKRGAPRSCMAPDVLLV 339
            .::   .|.:|..:.:|.|...||....|......|:|            :||..|        .
Mouse   347 PEV---FSTTTQDKANEILVQQGLESLTDRSKEHVLNQ------------KGASTS--------D 388

  Fly   340 DNESSPDHGPTDEVDHESTKMDKLASEEYISTSNISVEAVVKDGNFFLKILKEEQSRLLVLAALA 404
            .|.:|....|..|.....|....                  .|..:|.|||:.|..|   |.:..
Mouse   389 SNHASVKGVPCSEASEGQTSQPP------------------HDVPYFRKILQSETDR---LTSHC 432

  Fly   405 EKYADALSTNPDISEDTFGLLRSASGKARLLVSQKMKQFEGLCHNNLNRSPEDKFPTTLDDLQGF 469
            :::...|..  ||.::..||:|:..|:.|||:.::.:|||||..|...:..|.:  ||..||.||
Mouse   433 QEWEGKLDL--DIPDEAKGLIRTTVGQTRLLIKERFRQFEGLVDNCEYKRGEKE--TTCTDLDGF 493

  Fly   470 WDMVYLQVEHVDSIFADIEKLKSNDWKVKAQSVADQPDLHTIPTKTIKPSKVGVSQVKTVGKASS 534
            ||||..||:.|:..|.::.||:::.||          |.:. |:|.:...|:      ..|:.|.
Mouse   494 WDMVSFQVDDVNQKFNNLIKLEASGWK----------DSNN-PSKKVLRKKI------VPGRTSK 541

  Fly   535 VRVNGSAPPPPNSAAALKREAQRKLLLEMKRQRREAMTAAAKLNPINVD 583
            .:.:..     ..|||..|.|..|..::.:.|:.....|||..|...||
Mouse   542 AKQDDD-----GRAAARSRLAAIKNAMKGRPQQEVQAHAAAPENTKEVD 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vlcNP_524868.1 GKAP <381..>496 CDD:460897 41/114 (36%)
Dlgap5NP_001411713.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 134..282 31/181 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 377..413 10/73 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 629..654
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 735..757
Blue background indicates that the domain is not in the aligned region.

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