DRSC/TRiP Functional Genomics Resources

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Protein Alignment vlc and dlgap2

DIOPT Version :10

Sequence 1:NP_524868.1 Gene:vlc / 46078 FlyBaseID:FBgn0259978 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_031758364.1 Gene:dlgap2 / 100489352 XenbaseID:XB-GENE-986275 Length:1018 Species:Xenopus tropicalis


Alignment Length:654 Identity:157/654 - (24%)
Similarity:241/654 - (36%) Gaps:163/654 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GSCSLDVDADSSDISDTSGSLN-----FPTPV-------SVRDITREFTANLRERCVPN--LPPQ 59
            ||....::.||.| ||||...:     .|.|:       |..::..:..........|.  |.|.
 Frog   395 GSYIKAMEEDSGD-SDTSPKTSPKISPRPEPLLKSVGQRSHVEVQNQSYLQAASEMPPGHILDPS 458

  Fly    60 PQHKTPAYVESRSSELEHMVLSPAIVECDQEPSSNDFDETSAE---NSQEAPEKKPS-------- 113
            ..:.:|.: .||:......|.:.:...|    .|.||...|.:   .|:|.||.|.:        
 Frog   459 GNYNSPKF-RSRNQSYMRAVSTLSQASC----VSQDFLIESLQECFTSKEYPEIKMAETEINGQY 518

  Fly   114 -----------------YLNLACC--VNGYSNLTTYDSKIRQD------INKSREVSPIRPSTSS 153
                             .|:|..|  ...:|.|....:...||      |..|...|..| ||::
 Frog   519 ESVNESVFSEMDSHAVDALDLPGCFRTRSHSYLRAIQAGYSQDDDCIPAITTSNVTSSTR-STTA 582

  Fly   154 LQYCKRNHFLATPTLHSMPSPATKCKPI-----EPNNNSNDSSGNFS----------SGSGHSNG 203
            ..|.   ::..||.  .:| |.|..||:     :.:..|...:.:.|          .|.|..|.
 Frog   583 ATYA---NYKKTPP--PVP-PRTTSKPLISVTAQSSTESTQDAYHDSRTQRISPWPHDGRGLYNS 641

  Fly   204 NGSFIKQRVERLYGPGALAQGFYSPKKHG--QSPSNAA------------GRSERG-QVE-IDSL 252
            ..|....:...|....|.|....|..|..  :|.|:.|            .||..| ||| .||.
 Frog   642 TDSLDSNKAMNLALESAAAHRHVSEIKSSSVKSTSDKAVLVTKSDDFLKKRRSSIGIQVEAADSD 706

  Fly   253 QGSELARKFK----QLSPSKDYGEFRKKMQKKCSQSTTARIDEPLHSPGLNGDLDLPVFRHLSQE 313
            ..|:..|::.    |:...|..|.|::      |.|.||.:...|...|..|        |::.|
 Frog   707 SESKGHREYHSVGVQVEDEKRQGRFKR------SNSVTAAVQADLELEGFPG--------HVTME 757

  Fly   314 ----------FRAQLPTVSPKRGAPRSCMA-------PDVLLVDNESSPDHGPTDEVDHESTKMD 361
                      .|...|:...:.||.|:...       .|..:.|..:.|...|..|..||:....
 Frog   758 DKGLQFGSSFQRHSEPSTPTQYGAVRTVRTQGLFSYREDYRMPDTSNLPPPDPWLEPSHEAVDSG 822

  Fly   362 KLASEEYISTSNISVEAVVKDGNFFLKILKEEQSRLLVLAALAEKYADALSTNPDISEDTFGLLR 426
            :::...             :||.:|:|:|..|..|:.......|:.|:    ..|::|:..|.:|
 Frog   823 RISPSR-------------QDGTWFMKLLHAETKRMEEWCKDMEREAE----ENDLTEENLGKIR 870

  Fly   427 SASGKARLLVSQKMKQFEGLCHNNLNRSPEDKFPTTLDDLQGFWDMVYLQVEHVDSIFADIEKLK 491
            ||.|.|:||:|||.:||..||..|::.|...: ||: .||.||||::.|.:|.|...|..:.:||
 Frog   871 SAVGSAQLLMSQKFQQFYWLCQQNMDPSAMPR-PTS-QDLAGFWDLLQLSIEDVSMKFDKLHQLK 933

  Fly   492 SNDWKVKAQSVADQPDLHTIPTKTIKPSKVGVSQVKTVGKASSVRVNGSAPPPPNSAAALKREAQ 556
            :|:||     ..|.|:     .|..|...:.:.:..|.||....|......|...     ::||:
 Frog   934 ANEWK-----AVDSPE-----KKDDKKLPLPIPKKPTRGKFPITREKSLDLPDRQ-----RQEAR 983

  Fly   557 RKLL 560
            |:|:
 Frog   984 RRLM 987

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vlcNP_524868.1 GKAP <381..>496 CDD:460897 43/114 (38%)
dlgap2XP_031758364.1 GKAP 690..1018 CDD:460897 93/346 (27%)

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