DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acsl and lcf2

DIOPT Version :9

Sequence 1:NP_001260810.1 Gene:Acsl / 46068 FlyBaseID:FBgn0263120 Length:728 Species:Drosophila melanogaster
Sequence 2:NP_596185.1 Gene:lcf2 / 2541350 PomBaseID:SPBP4H10.11c Length:689 Species:Schizosaccharomyces pombe


Alignment Length:696 Identity:231/696 - (33%)
Similarity:359/696 - (51%) Gaps:51/696 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 IEAKIVRNDDNELTYRT-------TDPPRDVHVKMLQENIDTLEKVFNYVAKTYTSKRCLGTRQI 122
            :|.|..:.......||:       .|.|.|        .:.|:..:....||.:..|:.:|:|::
pombe     9 VETKDSKQPGESYIYRSIHSAGKLLDTPED--------GVSTVYDLLCTAAKNHGEKQAMGSRKL 65

  Fly   123 LSEEDEVQQ------NGRVFKK-----YNLGDYKWKTFTEAERTAANFGRGLRELGQKPRENIVI 176
            :.|..|.::      |..|.:|     |.||.|::.:|.:....|...|.||...|......::.
pombe    66 IKENREEREIIRKVDNEEVVEKKLWTTYELGPYEYISFNKVYEIALALGSGLVASGITSETTMLF 130

  Fly   177 FAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHCITETEVTTVITSHDLLPKFKTLLDKCPL 241
            ||.|.|:|...|.||..||:||||.|.|||:||:...:.|.:...:.|..:|:||....|.:...
pombe   131 FAATSAKWFTTAQGCSSQAIPIVTAYETLGEDGIYTSLDECKSRAIFTDPNLIPKLLGPLKQSTW 195

  Fly   242 VKTIIY----IEDQLQKTETTGFKEGVKILPFNQVVKTGQDSKFEHVPPKGDDIAIIMYTSGSTG 302
            ||.|:.    .||.::..::|.  ..|:|:.::.::..|::......|||.|||...||||||||
pombe   196 VKLIVCSSTPSEDLVELVKSTA--PDVEIITYDNLLSLGKEKPQPPHPPKADDICCYMYTSGSTG 258

  Fly   303 TPKGVLLSHKNCIATMKGFVDMVP--IYPDDVLIGFLPLAHVFELVAESVCLMTGVPIGYSTPLT 365
            .||||:|.|:|.||.:.|...::.  |...|.::.:|||||:||.:.|..||..|..:||::|.|
pombe   259 KPKGVVLLHRNIIAALGGINRILSQHINVKDYVLAYLPLAHIFEFIFEMCCLYWGGVLGYASPRT 323

  Fly   366 LIDTSSKIKRGCKGDATVLKPTCMTSVPLILDRISKGINDKVNSGSAFKKSLFKFLYQYKVKWVQ 430
            |.|.|..   .||||.|..:||.:..||.:.:.|.|||..||:|..|.::.:|......|...::
pombe   324 LTDASVV---NCKGDLTEFRPTVLIGVPAVYELIKKGILAKVSSMPAHRQKVFSGSLSLKQYLIE 385

  Fly   431 RGYK-TPLIDKLVFKKVAKLMGGKVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGAT 494
            |... :..:|.:||.||....||::|..:||||.|:|.|...:.:|:| .::.|||||||.:|:.
pombe   386 RNLPGSAALDAIVFNKVKAATGGRLRYCISGGAALAASTQAFLSSCIC-PVLPGYGLTETCAGSF 449

  Fly   495 VMDYRDM-TYGRT-GGPLTVCDIRLVNWEEGNYRVTNKPYPQGEVLIGGECVSQGYYKLPGKTNE 557
            |:..... .|..| |.|:...:.:||:..:..|...:.| |:|||.|.|..|..||...| :.|:
pombe   450 VLSPEQWHLYANTVGFPIPSIEFKLVDIPDLGYYTDSSP-PRGEVWIRGPAVCNGYLNRP-EDNK 512

  Fly   558 DFFEEDGQRWFKTGDIGEIQADGVLKIIDRKKDLVKLQAGEYVSLGKVESELKTCGIIENICVYG 622
            ..|.|||  ||||||:|||.....|::|||||::||...|||::|.|:|::..|..::.|:|.|.
pombe   513 AAFTEDG--WFKTGDVGEIAKGNTLRLIDRKKNIVKSLNGEYIALEKIEAQFFTSPLVSNVCAYA 575

  Fly   623 DPTKQYTVALVVPNQNHLEELAQK------HGLGDKSFEELCSSPIIEKAILKEIAEHARKCKLQ 681
            |......|.:|.|::|.|.....|      :|..:.:...||....::..||||:....::.:|.
pombe   576 DVNHAKPVVIVNPDENGLRTYLTKNSGSSFNGNPNDTLTNLCKDSGVQHLILKELINIGKQQRLA 640

  Fly   682 KYEVPAAITLCKEVWSPDMGLVTAAFKLKRKDIQDRYQHDINRMYA 727
            ..|:|..:.|....|:.:...:||:.|:||:.|...|..:|.:.|:
pombe   641 SIEIPEGVVLSDFEWTAENNFLTASRKVKRQVIVAHYSDEIQKAYS 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcslNP_001260810.1 PLN02387 95..727 CDD:215217 223/657 (34%)
LC-FACS_euk 142..726 CDD:213293 210/598 (35%)
lcf2NP_596185.1 FAA1 54..689 CDD:223953 221/643 (34%)
LC-FACS_euk 96..685 CDD:213293 210/598 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 291 1.000 Domainoid score I277
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 395 1.000 Inparanoid score I394
OMA 1 1.010 - - QHG53493
OrthoFinder 1 1.000 - - FOG0001203
OrthoInspector 1 1.000 - - otm46987
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43272
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X593
TreeFam 1 0.960 - -
1110.930

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