DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acsl and Acsl1

DIOPT Version :9

Sequence 1:NP_001260810.1 Gene:Acsl / 46068 FlyBaseID:FBgn0263120 Length:728 Species:Drosophila melanogaster
Sequence 2:NP_036952.1 Gene:Acsl1 / 25288 RGDID:2015 Length:699 Species:Rattus norvegicus


Alignment Length:703 Identity:220/703 - (31%)
Similarity:349/703 - (49%) Gaps:70/703 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RVKA--KPINQKMLVDESKYAPDDIEAKIVRNDDNELTYRTTDPPRDVHVKMLQENIDTLEKVFN 105
            |.||  .|.:..|...|.....:.:....|..||..|.|             ..:::.|:...|.
  Rat    47 RPKALKPPCDLSMQSVEVTGTTEGVRRSAVLEDDKLLLY-------------YYDDVRTMYDGFQ 98

  Fly   106 YVAKTYTSKRCLGTRQILSEEDEVQQNGRVFKKYNLGDYKWKTFTEAERTAANFGRGLRELGQKP 170
            ...:......|||:|                 |.| ..|:|.::.:....|...|..|.:.|.||
  Rat    99 RGIQVSNDGPCLGSR-----------------KPN-QPYEWISYKQVAEMAECIGSALIQKGFKP 145

  Fly   171 --RENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHCITETEVTTVITSHDLLPKFK 233
              .:.|.||::.|.||:....|||..:|.:|.:|.|||.|.:.:.:.:.|::.:..  |...|.|
  Rat   146 CSEQFIGIFSQNRPEWVTIEQGCFTYSMVVVPLYDTLGTDAITYIVNKAELSVIFA--DKPEKAK 208

  Fly   234 TLLD-----KCPLVKTIIYIEDQLQKTETTGFKEGVKILPFNQVVKTGQDSKFEHVPPKGDDIAI 293
            .||:     ..|.:|.|:.::.........|.|.||:|:....:...|:.::.:..||:.:|:||
  Rat   209 LLLEGVENKLTPCLKIIVIMDSYDNDLVERGQKCGVEIIGLKALEDLGRVNRTKPKPPEPEDLAI 273

  Fly   294 IMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVP----IYPDDVLIGFLPLAHVFELVAESVCLMT 354
            |.:|||:||.|||.:::|:|.:....||:....    ..|:||||.||||||:||.|.|.|.|..
  Rat   274 ICFTSGTTGNPKGAMVTHQNIMNDCSGFIKATESAFIASPEDVLISFLPLAHMFETVVECVMLCH 338

  Fly   355 GVPIGY--STPLTLIDTSSKIKRGCKGDATVLKPTCMTSVPLILDRISKGINDKVNSGSAFKKSL 417
            |..||:  .....|:|           |..||:||....||.:|:|:...|..:.|  ::.|:.|
  Rat   339 GAKIGFFQGDIRLLMD-----------DLKVLQPTIFPVVPRLLNRMFDRIFGQAN--TSVKRWL 390

  Fly   418 FKFLYQYKVKWVQRGY--KTPLIDKLVFKKVAKLMGGKVRIIMSGGAPLSADTHEQIKTCLCLEL 480
            ..|..:.|...::.|.  ...|.|||:|.|:...:|||||::::|.||:||.....::..|..:.
  Rat   391 LDFASKRKEAELRSGIVRNNSLWDKLIFHKIQSSLGGKVRLMITGAAPVSATVLTFLRAALGCQF 455

  Fly   481 IQGYGLTETTSGATVMDYRDMTYGRTGGPLTVCDIRLVNWEEGNYRVTNKPYPQGEVLIGGECVS 545
            .:|||.||.|:|..:....|.|.|..|.|:....|:||:.|:.||:...   .:|||.:.|..|.
  Rat   456 YEGYGQTECTAGCCLSLPGDWTAGHVGAPMPCNYIKLVDVEDMNYQAAK---GEGEVCVKGANVF 517

  Fly   546 QGYYKLPGKTNEDFFEEDGQRWFKTGDIGEIQADGVLKIIDRKKDLVKLQAGEYVSLGKVESELK 610
            :||.|.|.:|.| ..::||  |..|||||:...:|.||||||||.:.||..|||::..|:|:...
  Rat   518 KGYLKDPARTAE-ALDKDG--WLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYL 579

  Fly   611 TCGIIENICVYGDPTKQYTVALVVPNQNHLEELAQKHGLGDKSFEELCSSPIIEKAILKEIAEHA 675
            ....:..:.|:|:..:.:.:|:|||:...|...|||.|. ..||||||.:..|.||||:::.:..
  Rat   580 RSEAVAQVFVHGESLQAFLIAIVVPDVEILPSWAQKRGF-QGSFEELCRNKDINKAILEDMVKLG 643

  Fly   676 RKCKLQKYEVPAAITLCKEVWSPDMGLVTAAFKLKRKDIQDRYQHDINRMYAS 728
            :...|:.:|....|.:..|::|.|.||:|...|.||.::::.::..|:.:|::
  Rat   644 KNAGLKPFEQVKGIAVHPELFSIDNGLLTPTLKAKRPELRNYFRSQIDELYST 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcslNP_001260810.1 PLN02387 95..727 CDD:215217 208/646 (32%)
LC-FACS_euk 142..726 CDD:213293 200/598 (33%)
Acsl1NP_036952.1 LC-FACS_euk 117..695 CDD:341250 200/599 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53493
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.