DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acsl and acs-3

DIOPT Version :9

Sequence 1:NP_001260810.1 Gene:Acsl / 46068 FlyBaseID:FBgn0263120 Length:728 Species:Drosophila melanogaster
Sequence 2:NP_503540.1 Gene:acs-3 / 178677 WormBaseID:WBGene00020343 Length:653 Species:Caenorhabditis elegans


Alignment Length:695 Identity:185/695 - (26%)
Similarity:323/695 - (46%) Gaps:102/695 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 ELTYRTTDPPRDVHVKMLQENIDTLEKVF---NYVAKTYTSKRCLGTRQILSEEDEVQQNGRVFK 137
            ||..|..|.|     :.::|::...:.:.   :.:.||        ...:|:...::..|..:|.
 Worm    11 ELFSRLVDGP-----ERIRESVQVPKPITGCPDGITKT--------VWDVLTRSAQLNPNAPLFG 62

  Fly   138 KYNLGDYKWKTFTEAERTAANFGRGLRELGQKPREN---IVIFAETRAEWMIAAHGCFKQAMPIV 199
            :...|.:.:.|:.||...|...|.|:..:.||.:..   |.|......::|...||         
 Worm    63 ESVNGRHVYTTYREAVEEATIIGSGIVAIMQKNQSTNKLIGIAGIHSRKYMHTMHG--------- 118

  Fly   200 TVYATLGDDGVAHCITETEVTTVITSHDLLPKFKTL---LDKCPLVKTIIYIEDQ---------- 251
                          |:..::|||...|.  .|.:||   :|.|.|  .||:.|:.          
 Worm   119 --------------ISGFDLTTVPLYHQ--SKLETLCDIIDNCKL--EIIFCENAKRAEGFLSSK 165

  Fly   252 -------------LQKTETTGFKEGVKILPFNQVVKTGQDSKFEHVPPKGDDIAIIMYTSGSTGT 303
                         |.||.|....:.|:::..::..:.|:.:|...|.||.:...:|.:|||:||.
 Worm   166 LGDRLRSLKTLIILDKTTTLQKHDDVEVMSLDEFKEIGKRNKRNPVKPKPETTYVICHTSGTTGR 230

  Fly   304 PKGVLLSHKNCIATMKG-FVDMVPIYP-----DDVLIGFLPLAHVFELVAESVCLMTGVPIGY-- 360
            ||||.:||.:.:.::.| |......|.     :|....||.|||::|.:.:::.:..|..||.  
 Worm   231 PKGVEMSHGSLVTSVSGIFTSWTIAYKWKFGLEDTYFSFLSLAHIYEHLIQTLTIYFGGKIGIYD 295

  Fly   361 STPLTLIDTSSKIKRGCKGDATVLKPTCMTSVPLILDRISKGINDKVNSGSAFKKSLFKFLYQYK 425
            ....|||....|           |:||.::.||.:|:::.:.::|.|.......:.||.:..:.|
 Worm   296 GNTATLIPQIQK-----------LEPTIVSLVPRLLNKLYEAVHDGVAKKGFIARKLFDYAKKTK 349

  Fly   426 VKWVQRG---YKTPLIDKLVFKKVAKLMGGKVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLT 487
            .:.:|||   |.| ..||:||||:..::|||::::.|||||::.:.....:......|::|||.|
 Worm   350 ARQLQRGVLRYDT-FFDKIVFKKLKLMLGGKLKVLTSGGAPITKEVKTFTRYAYGCPLVEGYGQT 413

  Fly   488 ETTSGATVMDYRDMTYGRTGGPLTVCDIRLVNWEEGNYRVTNKPYPQGEVLIGGECVSQGYYKLP 552
            |.::..|:....|.|||..|||.....::||:..|.||...|   .:|||...|..:..||::.|
 Worm   414 ECSAAGTLTLPWDTTYGNVGGPAPWAQVKLVDVPEKNYFSMN---DEGEVCFRGNAMMTGYFQDP 475

  Fly   553 GKTNEDFFEEDGQRWFKTGDIGEIQADGVLKIIDRKKDLVKLQAGEYVSLGKVESELKTCGIIEN 617
            ..|.:..   |.:.|..|||||:....|.|:|||||.::.||..|::||..::|:......:|..
 Worm   476 ELTAKTI---DSEGWLHTGDIGKWLPTGGLQIIDRKNEMFKLSQGDFVSPIQIEAIYANSPLITQ 537

  Fly   618 ICVYGDPTKQYTVALVVPNQNHLEELAQKHGL-GDKSFEELCSSPIIEKAILKEIAEHARKCKLQ 681
            |.|.|...:.:.|.:||.:....::|.....| |.:|.|.:..:..::.|::.|:.::|::..||
 Worm   538 IYVTGKTERSFLVGIVVLDLPRFKQLPLVKALDGKESIEMIMENKEVKNAVIAELNKYAKQNGLQ 602

  Fly   682 KYEVPAAITLCKEVWSPDMGLVTAAFKLKRKDIQDRYQHDINRMY 726
            ..|:...:.|..:.::.:.||:|:..|.:||.::|.:...|.:||
 Worm   603 TIELIRNVHLTLQEFTEENGLITSTLKNRRKILEDYFAPQIAKMY 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcslNP_001260810.1 PLN02387 95..727 CDD:215217 180/676 (27%)
LC-FACS_euk 142..726 CDD:213293 172/624 (28%)
acs-3NP_503540.1 LC-FACS_euk 67..648 CDD:341250 174/626 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53493
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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