DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sply and hdc

DIOPT Version :9

Sequence 1:NP_652032.1 Gene:Sply / 46059 FlyBaseID:FBgn0010591 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_005169965.1 Gene:hdc / 793609 ZFINID:ZDB-GENE-080102-5 Length:608 Species:Danio rerio


Alignment Length:607 Identity:111/607 - (18%)
Similarity:201/607 - (33%) Gaps:188/607 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 QDENLYIRGKRQFFKFAKKIPAVR-RQVETELAKAKNDFETEIKKSNAHLTYSETLPEKGLSKEE 112
            |.:...:|||.......:.:..:| |:|..::   :..|...:..|:|        |.:......
Zfish     2 QPQEYMLRGKEMVEYIHQYLTGIRERRVVPDV---QPGFMRPLLPSSA--------PYEPEDWST 55

  Fly   113 ILRLVDEHLKTGHYNWRDGRVSGAVYGYKPDLVELVTEVYGKASYTNPLHADLF----------P 167
            |::.|:..:..|..:|:    |..::.|.|.|       ....|....:.||..          |
Zfish    56 IMQDVENIIMPGVVHWQ----SPHMHAYFPAL-------NSWPSLLGDMLADAINCLGFTWASSP 109

  Fly   168 GVCKMEAEVVRMACNLF---------HGNSASCGTMTTGGTESIVMAMKAYR-DFAREYKG---- 218
            ...::|..|:...|...         |..|...|.:.:..:|..::|:.|.| |...:.|.    
Zfish   110 ACTELEMCVLDWLCKALGLPDHYLHHHPQSTGGGILQSTVSECTLVALLAARKDRILQMKSEATH 174

  Fly   219 -ITRPNIVVPKTV-------HAAFDKGGQYFNIHVRSVDVDP------ETYEVDIKKFKRAINRN 269
             .|..:::..:.|       |::.:|.|....:.:|.:..|.      ||.:..:::.:|:    
Zfish   175 TDTDESVLNSRLVAYASDQAHSSVEKAGLISLVKIRFLQTDAVFSLRGETLQRAVEEDRRS---- 235

  Fly   270 TILLVGSAPNFPYGTI--------DDIEAIAALGVKYDIPVHVDACLGSFVVALVRNAGYKLRPF 326
                 |..|.....|:        |.::.:..:.|:..:.:||||......: |.....|.|...
Zfish   236 -----GLIPVMVCATLGSTGVCSFDRLDELGPVCVREGLWLHVDAAYAGSAL-LCPELRYFLDGI 294

  Fly   327 DFEVKGVTSISADTHKYGFAPKGSSVILYS------------------DKKYKDHQFTVTTD--- 370
            .|         ||:  :.|.|....::.:.                  |..|..|..:..||   
Zfish   295 QF---------ADS--FVFNPSKWMLVHFDCTAFWVKNKMKLQQTFTVDPLYLRHDNSNATDFMH 348

  Fly   371 WPGGVYGSPTVNGSRAGGIIAACWATMMSFGYDGYLEATKRIVDTARYIERGVRDID-------- 427
            |.     .|.....|:    ...|..:.|||.....|..:..|:.|:..|..||:..        
Zfish   349 WQ-----IPLSRRFRS----LKLWFVIRSFGLKKLQEHIRHGVEMAKLFESLVRNDTHFQIPAQR 404

  Fly   428 --GIFIF----GKPATSVI---------------ALGSNVFDIFRLSDSL-----CKLGWNL--- 463
              |:.:|    |..||..:               |:|:.:...|.::..|     .:..|:|   
Zfish   405 HLGLVVFCLRAGNAATQELLRKLTRSGRMFLIPAAVGNQLILRFSVTSQLTTEQDIRRDWSLIQQ 469

  Fly   464 ---NALQFPSGIHLCVT----------------DMHTQPGVADKFIAD-----VR--SCTAEIMK 502
               ..||  ||:   ||                .:||:|.:..:.:..     ||  ||:||:..
Zfish   470 AAREVLQ--SGV---VTRQPSVTSDPESEPESLTIHTEPMLDQRLVRQGQRRAVRSYSCSAELPP 529

  Fly   503 DPGQPVVGKMALYGMAQSIPDR 524
            .||:....:.|...:....|:|
Zfish   530 APGRTQTHRDAPLQLIPEQPER 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SplyNP_652032.1 DOPA_deC_like 132..494 CDD:99743 85/489 (17%)
hdcXP_005169965.1 Pyridoxal_deC 35..414 CDD:278699 75/427 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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