DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sply and SecS

DIOPT Version :9

Sequence 1:NP_652032.1 Gene:Sply / 46059 FlyBaseID:FBgn0010591 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_649556.3 Gene:SecS / 40681 FlyBaseID:FBgn0037347 Length:478 Species:Drosophila melanogaster


Alignment Length:531 Identity:102/531 - (19%)
Similarity:178/531 - (33%) Gaps:163/531 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 RGKRQFFK---FAKKIPAVRRQVETELAKAKNDFETEIKKSNAHLTY---SETLPEK-GLSKEEI 113
            |.|::.||   ..:|:|             ||.:..|..:...|:..   |...|.| ||.:.| 
  Fly    26 RSKQRSFKELLEKRKLP-------------KNGWSDERIEELVHMLASLDSNNYPHKVGLGERE- 76

  Fly   114 LRLVDEHLKTGHYNWRDGRVSGAVYGYKPDLVELVTEVYGK---ASYTNPLHADLFPGVCKMEAE 175
            .|:..:.:...|||:..|      .|...||:|...:..|.   |..||.|..||..|:      
  Fly    77 ARIACKLVARRHYNFGHG------IGRSGDLLEAQPKAAGSTLLARLTNALILDLIRGI------ 129

  Fly   176 VVRMACNLFHGNSASCG-----TMTTGGTESI-VMAMKAYRDFARE-----------YKGITRPN 223
                       ...||.     .|.||.|.:: :.:::..|..||.           :|.||...
  Fly   130 -----------GLPSCAGCFLVPMCTGMTLTLCLQSLRKRRPGARYVLWSRIDQKSCFKAITATG 183

  Fly   224 ---IVVPKTVHA-AFDKGGQYFNIHVRSVDVDPETYEVDIKKFKRAINRNTILLVGSAPNFPYGT 284
               :|:|..:.. :.:.....|...::|:.||                 :.:.|..:...|....
  Fly   184 LVPVVIPCLIKGESLNTNVDLFREKIKSLGVD-----------------SILCLYTTTSCFAPRN 231

  Fly   285 IDDIEAIAALGVKYDIPVHVDACLGSFVVALVR--NAGYKLRPFDFEVKGVTSISADTHKYGFAP 347
            .|||..::.|..::.||..|:...|.....:|.  ....::...|:.|:     |:|  |....|
  Fly   232 SDDIAEVSKLSKQWQIPHLVNNAYGLQAKEIVNQLECANRVGRIDYFVQ-----SSD--KNLLVP 289

  Fly   348 KGSSVIL-YSDKKYKDHQFTVTTDWPGGVYGSPTVNGSRAGGIIAACWATMMSFGYDGYLEATKR 411
            .||:::. :::....|    |.:.:.|...||.:::          ...|::|.|.:|:.....:
  Fly   290 VGSAIVASFNESVLHD----VASTYAGRASGSQSLD----------VLMTLLSLGRNGFRLLFDQ 340

  Fly   412 IVDTARYIERGVRD---------IDGIF-----------IFGKPATSVIALGS------------ 444
            ..:...|:...:|.         ||..|           :.|....|:..|||            
  Fly   341 RGENFNYLRENLRKFAEPRGEIVIDSRFNSISLAITLATLAGDQMKSITKLGSMLHMRGVSGARV 405

  Fly   445 ------NVFDIFRLSDSLCKLGWNLNALQFP-----SGIHLCVTDMHTQPGVADKFIADVRSCTA 498
                  ...|.....|    .|.:.:.||.|     :||.:...::       |||......|..
  Fly   406 IVPGQNKTIDGHEFLD----FGSHRSNLQVPYLTVAAGIGITREEI-------DKFFDIFNKCWN 459

  Fly   499 EIMKDPGQPVV 509
            :|.:...:.::
  Fly   460 QIFQTKNEKIM 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SplyNP_652032.1 DOPA_deC_like 132..494 CDD:99743 79/431 (18%)
SecSNP_649556.3 AAT_I 12..457 CDD:302748 100/516 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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