DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta1 and hslV

DIOPT Version :10

Sequence 1:NP_652031.2 Gene:Prosbeta1 / 46058 FlyBaseID:FBgn0010590 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_418367.1 Gene:hslV / 948429 ECOCYCID:EG11676 Length:176 Species:Escherichia coli


Alignment Length:128 Identity:36/128 - (28%)
Similarity:58/128 - (45%) Gaps:12/128 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 TTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRI-TDKVYCCRSGSAADTQAIADIVAYSLN 79
            |||::|..:|.|||..|.:.:.|..|......|:.|: .|||....:|..||...:.::....|.
E. coli     2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLE 66

  Fly    80 YHENQTNKDALVFEAASEFR-NYCYSYRESLL------AGIIVAGWDE--QRGGQVYSIPLGG 133
            .|:....|.|:  |.|.::| :......|:||      |.:|:.|..:  |....:.:|..||
E. coli    67 MHQGHLVKAAV--ELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGG 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta1NP_652031.2 proteasome_beta_type_6 16..203 CDD:239731 36/128 (28%)
hslVNP_418367.1 PRK05456 1..172 CDD:235477 36/128 (28%)

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