DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta1 and PRE3

DIOPT Version :9

Sequence 1:NP_652031.2 Gene:Prosbeta1 / 46058 FlyBaseID:FBgn0010590 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_012533.1 Gene:PRE3 / 853456 SGDID:S000003538 Length:215 Species:Saccharomyces cerevisiae


Alignment Length:197 Identity:109/197 - (55%)
Similarity:147/197 - (74%) Gaps:1/197 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VSTGTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRITDKVYCCRSGSAADTQAIADIVAY 76
            ||.||:||||.|..||::||||||::|||:||||||||||:.||::|||||||||||||||||.|
Yeast    16 VSLGTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQY 80

  Fly    77 SLNYHENQTNKDALVFEAASEFRNYCYSYRESLLAGIIVAGWDEQRGGQVYSIPLGGMLTRESCT 141
            .|..:.:|....: ...|||.|:..||..:::|.|||||||:|::..|:||:|||||.:.:....
Yeast    81 HLELYTSQYGTPS-TETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYA 144

  Fly   142 IGGSGSSFIYGFVREHYRPNMALEDCVTFVKKAVQHAIYHDGSSGGVVRIGIITKDGIERRIFYN 206
            |.||||:||||:..:::|.||:.|:.|.|:|.::..||..|||||||:|:.::|..|:||.|||.
Yeast   145 IAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVERLIFYP 209

  Fly   207 TE 208
            .|
Yeast   210 DE 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta1NP_652031.2 20S_bact_beta 15..201 CDD:163402 101/185 (55%)
proteasome_beta_type_6 16..203 CDD:239731 102/186 (55%)
PRE3NP_012533.1 proteasome_beta_type_6 20..204 CDD:239731 100/184 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343015
Domainoid 1 1.000 203 1.000 Domainoid score I549
eggNOG 1 0.900 - - E1_KOG0174
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 218 1.000 Inparanoid score I778
Isobase 1 0.950 - 0 Normalized mean entropy S496
OMA 1 1.010 - - QHG54145
OrthoFinder 1 1.000 - - FOG0001868
OrthoInspector 1 1.000 - - oto98966
orthoMCL 1 0.900 - - OOG6_101390
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1014
SonicParanoid 1 1.000 - - X1224
TreeFam 1 0.960 - -
1514.740

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